Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2004 143 2e-28 seq2645 95.1 9e-14 >seq2004 Length=401351 Score = 143 bits (158), Expect = 2e-28 Identities = 748/1170 (64%), Gaps = 29/1170 (2%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||||||||| || || | ||| | || ||||| | || || | |||| Sbjct 15394 GTCATGACACCACCAGCAGTCTCGATACCCAAGGAGAGAGGGGCAACGTCGAGAAGGAGG 15453 Query 281723 ATAT--TTTGAAGTTTTTCATCAGTT-TGACCA-ACAAGAATAGCTGCTTGAATAGCAGC 281778 || | || | || || | || | | ||| |||||| |||| || || | ||||| Sbjct 15454 ATCTCGTTAGTAGACTTGGAAGAGGTGTCACCGGACAAGA-TAGCAGCCTGGACGGCAGC 15512 Query 281779 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 ||| || |||||||| |||||||| || | || | || | | || || |||||||| Sbjct 15513 ACCGTAGGCAACAGCCTCATCAGGGTTGATAGACTTGTTGGGCTCCTTGCCGTTGAAAAA 15572 Query 281839 ATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTT 281897 | |||| | | ||| | ||| |||||||| | || || || || || || |||| Sbjct 15573 GTCGGAAACCATCT-TCTGGATCTTGGGAATACGGGTAGAACCACCGACCAAGACGATTT 15631 Query 281898 CATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 281957 |||| || ||||| || | || | ||| | || || ||||| || | Sbjct 15632 CATGGACGGAGGATTTGTCGATCTTGGCATCGCGGAGGACACGCTCGACGGGCTCCATGG 15691 Query 281958 CAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA 282016 | | || | || || ||||||||||| ||| | || || || | || Sbjct 15692 TGGAACGGAAAAGATCCTGGCAGAGTTCTTCGAAACGAGCACGGGT--GATGGAGGTGTA 15749 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 || ||||| || ||||| | ||| || | ||||| | || || | | ||| || || Sbjct 15750 GAAGTCAATACCCTCGAAGAGAGAGTCGATCTCAATAGAGGTCTGGGCAGCAGAGGAGAG 15809 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT 282135 | || || ||||| || || || || | || | || | || || |||| | Sbjct 15810 GGTGCGCTTGGCACGCTCGCAAGCGGTGCGGAGACGACGGAGAGCACGAGC--ATTGGTA 15867 Query 282136 CAAA--TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 282193 | | || | || | || | |||||| || | ||| | | |||||||| || Sbjct 15868 GAGAGATCCTTCTTGTGCTTGCGCTTGAACTCGTTGACAAAGTGGTTCACAAGACGGTTG 15927 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || || || ||||| ||||| | ||| | || | |||| | || | || | || Sbjct 15928 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTAGACTTGACCTCAAAGATACCC 15987 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 ||||||| | ||| || | ||||| ||| ||||| |||| || ||||| | || Sbjct 15988 TCTTCAATGGTCAAGAGGGAGACATCGAAGGTACCACCGCCCAAGTCGAAAATCAAGACG 16047 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || ||| || || || ||||| ||||| |||| || |||||||| || || Sbjct 16048 TTACGTTCGCCCTCAGTCTTCTTGTCAAGGCCATAGGCAATGGCGGCAGCAGTAGGCTCG 16107 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || || || | | ||| |||||||| ||||| || ||||| || || ||||| | Sbjct 16108 TTGATGATACGGAGAACGTTAAGACCGGCAATGAGACCGGCATCCTTGGTAGCTTGACGC 16167 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAAT 282492 || || ||||| || || ||||||||||| | ||||||| |||| || | |||| Sbjct 16168 TGGGAGTCGTTGAAGTAGGCAGGAACAGTCACGACGGCAT-TGTTAACAGTTCCACCAAG 16226 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 || | || |||| | |||| || | || | ||| || || |||| || |||| Sbjct 16227 GTAGGACTCGGCAGTTTCTCTCATCTTGGTCAAGACCATGGAGGAGATTTCCTCAGGAGT 16286 Query 282553 ATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT-- 282609 | ||||||| || |||| | | |||| | |||| || || | || Sbjct 16287 GAACTGCTTGGTCTCGCCCTTGAAGTCA-ACTT-GGATGATGG--GCTTGCCGCCCTTGT 16342 Query 282610 -AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAATC 282666 |||| || || || ||| |||||||| | ||| |||| | || ||||| | Sbjct 16343 CGATAATCTTGAAAGGGAAATGCTTCATATCGGCTTG--GACTTCAGCATCGTTAAACTT 16400 Query 282667 TCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATA 282726 | ||| || | || || || || || | |||||||| || || | || |||||| Sbjct 16401 GCGACCGATGAGACGCTTGGCGTCGAAGACGGTATTGGTGGGGTTCATGGCGACTTGATT 16460 Query 282727 TTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGT 282786 || || |||||||| |||||| |||| || || || || | || | || || || || Sbjct 16461 CTTAGCAGCATCTCCGATCAGACGTTCGGTATCAGTGAAGGCGACGAAGGAGGGGGTAGT 16520 Query 282787 GCGATTACCTTGATCATTCGCAATAATTTC 282816 ||| || || || || || ||||| ||||| Sbjct 16521 GCGGTTTCCCTGGTCGTTGGCAATGATTTC 16550 >seq2645 Length=154107 Score = 95.1 bits (104), Expect = 9e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 || ||||||||||| | |||||||||||||| ||| ||||| | || || | || ||| Sbjct 68116 GAGTTTTTCTTCCACGCTATGGCTGGTCGTGAGGGTCTTATTGACACTGCCGTCAAGACT 68175 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 ||||| || ||||| ||||||||||| ||||| || |||||||| Sbjct 68176 GCTGAAACCGGTTACATTCAAAGAAAGCTTGTTAAAGCTCTTGAAGA 68222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740496663111624