Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_023729.1
Length=43036
Score E
Sequences producing significant alignments: (Bits) Value
seq559 318 2e-82
seq682 143 7e-30
>seq559
Length=35318
Score = 318 bits (352), Expect = 2e-82
Identities = 329/428 (77%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 35299 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 35358
|||| || ||||| || ||||| ||||||||||| ||| | ||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 35359 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCAGTCG 35418
|||||| || |||||||||||| | || |||||||||||||| ||||||| |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 35419 TTCCTCGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 35478
||||| ||| ||||| |||||||| ||||| | ||||| |||||||| ||||||||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 35479 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 35538
||||| ||||||||||||||||| ||||| || | ||||| ||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 35539 GCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 35598
|||||||| || | ||||| || || | ||||||| | | |||||||||||||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083
Query 35599 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAATCCCCG 35658
|| || ||||| |||||||||||||||||||| | ||||| | ||| |||| ||||
Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143
Query 35659 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 35715
|||||||| ||| |||| ||||||||| ||||| |||| ||| |||
Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200
Query 35716 CATGAGGT 35723
|| |||||
Sbjct 23201 CACGAGGT 23208
Score = 318 bits (352), Expect = 2e-82
Identities = 547/783 (70%), Gaps = 22/783 (3%)
Strand=Plus/Plus
Query 36129 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 36188
|||||||||||| | |||||| | |||||| | ||||| ||| || | || ||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713
Query 36189 CTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 36248
| | | | | | |||||| ||||||| |||||||| || ||||| | | | | |
Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773
Query 36249 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATTCATGAGTACGG 36308
||| ||||| | ||| ||| ||| | ||| || ||||| | || || ||
Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833
Query 36309 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGCGAACGCATCG 36367
|| | | || | | |||| ||||| | ||||| ||||| ||| || |
Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892
Query 36368 AAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCGAGAGAA 36427
| | || || || ||| | | || ||||||||||||| | || | | |
Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952
Query 36428 TGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 36487
||| || | ||||| || ||||| |||||| ||| |||||| ||||||||||||||
Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012
Query 36488 ACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 36547
||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||||
Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072
Query 36548 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG-- 36605
|||| | || || ||| | ||||| || || ||||||||||| | ||||||
Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129
Query 36606 -CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTGT 36664
|||||| |||||||| ||| ||||||| || ||||||| || ||||| |||||
Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189
Query 36665 CCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 36721
||||| |||||| || ||| ||| ||| ||||||||| | | | | |
Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246
Query 36722 GCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 36781
|||||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| |
Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303
Query 36782 GGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATT 36837
|| | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| |
Sbjct 25304 CGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362
Query 36838 CTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCCGACGTACCGGTCATC 36897
|||||| | | ||| ||||||| ||| | || || || ||||||||| ||||||| |
Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422
Query 36898 AAG 36900
|||
Sbjct 25423 AAG 25425
Score = 136 bits (150), Expect = 1e-27
Identities = 206/287 (72%), Gaps = 22/287 (8%)
Strand=Plus/Plus
Query 37197 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 37251
|||||| ||| |||||||| ||||| ||||| | | |||| || ||||||||
Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831
Query 37252 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 37308
||||| | |||||| || | ||||| |||||| |||||| || | |
Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888
Query 37309 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 37368
| |||||| |||||||| |||||||||||||| || ||||||||| || | ||| |
Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948
Query 37369 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 37428
| |||||| |||||||||| |||||| |||| || |||||||||||| |||| || |
Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005
Query 37429 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 37472
| ||| |||||||||||| || ||| || || |||| |||
Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052
>seq682
Length=20768
Score = 143 bits (158), Expect = 7e-30
Identities = 120/147 (82%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 38310 CGTGCTGACCGTCGCACACCTCAACCACACACCCGAGGACTGCGCCGACGACAACCTGCG 38369
||| || |||||||| |||||| ||||||| || ||| |||||| | | |||||||||
Sbjct 16698 CGTTCTCACCGTCGCGCACCTCGACCACACCCCGGAGAACTGCGACCCGGGCAACCTGCG 16639
Query 38370 CGCGATGTGCCAGGGCTGCCACCTGCACTACGACCGCGAGCACCACGCGCAGACCGCCGC 38429
||| |||||||||||||||||||| ||||||||||||||||||||| |||||| || ||
Sbjct 16638 CGCCATGTGCCAGGGCTGCCACCTCCACTACGACCGCGAGCACCACCGGCAGACGGCTGC 16579
Query 38430 TGCGACGCGCCGAGCTGCAGCCGAGGC 38456
|| | ||||| || || ||||||
Sbjct 16578 GGCCTCCCGCCGTGCCGCCATCGAGGC 16552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137589149191024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |