Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_023729.1 Length=43036 Score E Sequences producing significant alignments: (Bits) Value seq559 318 2e-82 seq682 143 7e-30 >seq559 Length=35318 Score = 318 bits (352), Expect = 2e-82 Identities = 329/428 (77%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 35299 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 35358 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 35359 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCAGTCG 35418 |||||| || |||||||||||| | || |||||||||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 35419 TTCCTCGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 35478 ||||| ||| ||||| |||||||| ||||| | ||||| |||||||| |||||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 35479 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 35538 ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 35539 GCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 35598 |||||||| || | ||||| || || | ||||||| | | ||||||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 35599 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAATCCCCG 35658 || || ||||| |||||||||||||||||||| | ||||| | ||| |||| |||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 35659 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 35715 |||||||| ||| |||| ||||||||| ||||| |||| ||| ||| Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200 Query 35716 CATGAGGT 35723 || ||||| Sbjct 23201 CACGAGGT 23208 Score = 318 bits (352), Expect = 2e-82 Identities = 547/783 (70%), Gaps = 22/783 (3%) Strand=Plus/Plus Query 36129 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 36188 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 36189 CTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 36248 | | | | | | |||||| ||||||| |||||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 36249 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATTCATGAGTACGG 36308 ||| ||||| | ||| ||| ||| | ||| || ||||| | || || || Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 36309 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGCGAACGCATCG 36367 || | | || | | |||| ||||| | ||||| ||||| ||| || | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 36368 AAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCGAGAGAA 36427 | | || || || ||| | | || ||||||||||||| | || | | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 36428 TGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 36487 ||| || | ||||| || ||||| |||||| ||| |||||| |||||||||||||| Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 36488 ACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 36547 ||||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||||||| Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 36548 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG-- 36605 |||| | || || ||| | ||||| || || ||||||||||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 36606 -CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTGT 36664 |||||| |||||||| ||| ||||||| || ||||||| || ||||| ||||| Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 36665 CCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 36721 ||||| |||||| || ||| ||| ||| ||||||||| | | | | | Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246 Query 36722 GCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 36781 |||||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| | Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303 Query 36782 GGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATT 36837 || | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| | Sbjct 25304 CGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 36838 CTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCCGACGTACCGGTCATC 36897 |||||| | | ||| ||||||| ||| | || || || ||||||||| ||||||| | Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 36898 AAG 36900 ||| Sbjct 25423 AAG 25425 Score = 136 bits (150), Expect = 1e-27 Identities = 206/287 (72%), Gaps = 22/287 (8%) Strand=Plus/Plus Query 37197 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 37251 |||||| ||| |||||||| ||||| ||||| | | |||| || |||||||| Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831 Query 37252 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 37308 ||||| | |||||| || | ||||| |||||| |||||| || | | Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888 Query 37309 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 37368 | |||||| |||||||| |||||||||||||| || ||||||||| || | ||| | Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948 Query 37369 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 37428 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005 Query 37429 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 37472 | ||| |||||||||||| || ||| || || |||| ||| Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 >seq682 Length=20768 Score = 143 bits (158), Expect = 7e-30 Identities = 120/147 (82%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 38310 CGTGCTGACCGTCGCACACCTCAACCACACACCCGAGGACTGCGCCGACGACAACCTGCG 38369 ||| || |||||||| |||||| ||||||| || ||| |||||| | | ||||||||| Sbjct 16698 CGTTCTCACCGTCGCGCACCTCGACCACACCCCGGAGAACTGCGACCCGGGCAACCTGCG 16639 Query 38370 CGCGATGTGCCAGGGCTGCCACCTGCACTACGACCGCGAGCACCACGCGCAGACCGCCGC 38429 ||| |||||||||||||||||||| ||||||||||||||||||||| |||||| || || Sbjct 16638 CGCCATGTGCCAGGGCTGCCACCTCCACTACGACCGCGAGCACCACCGGCAGACGGCTGC 16579 Query 38430 TGCGACGCGCCGAGCTGCAGCCGAGGC 38456 || | ||||| || || |||||| Sbjct 16578 GGCCTCCCGCCGTGCCGCCATCGAGGC 16552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137589149191024