Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq934 138 2e-27 >seq934 Length=187681 Score = 138 bits (152), Expect = 2e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||||| ||| ||| ||||| || ||||| || || || | | || ||||| Sbjct 10250 ACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCA 10191 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 ||||| || |||||||| || || | |||||| ||||| || || || ||||||||||| Sbjct 10190 AGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGG 10131 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGTTATCGTCTT 82780 || |||| || || || || || || || | ||| ||| || || || || || ||||| Sbjct 10130 ATTTTTGTCTTCACGTTGTCGATTGTGTC-TGAGGATTCGACCTCTAACGTAATAGTCTT 10072 Query 82781 GCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| ||||| |||||||| ||||| Sbjct 10071 GCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 127 bits (140), Expect = 4e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | ||| || || ||||| ||||| || |||||||||| Sbjct 9814 TACCACCGCGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAG 9755 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||||| || || || ||||| || ||||| | | || ||||| |||| Sbjct 9754 AGAGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAG 9695 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| ||||| | ||| || || || || ||||| || || | Sbjct 9694 GGATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCA 9635 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 |||| | ||| || ||||| || || | ||||| |||| ||| Sbjct 9634 CTTCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAACTAT 9592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981792933003436