Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2704 145 7e-30 seq1640 125 7e-24 seq934 109 5e-19 seq1954 87.8 2e-12 >seq2704 Length=633058 Score = 145 bits (160), Expect = 7e-30 Identities = 358/533 (67%), Gaps = 9/533 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| ||||||||||| |||||||| |||||||| || || || ||||||||||| Sbjct 56152 CTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATGTTGTC 56211 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| ||||| |||| ||| |||| ||| | || | || |||| Sbjct 56212 CATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAGAGCGACAAGCAA 56271 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 | ||| || |||||||| ||||| | ||||||| | | ||||||||| || || | Sbjct 56272 CCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGAG-AAGGG 56330 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | | || | | | || || || || || || || || || || || ||| | | Sbjct 56331 CGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTCTGTGATAACAG 56390 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCG-GTAGTACAGGCACGCA 120648 | | | ||| |||| || | | | || | || | | || || || ||| Sbjct 56391 CCTCGACGGCCTGG--GGGC-TCGGGCGGT-GACGAAGGTGAGAGAAGAGAAGACAGGCA 56446 Query 120649 AAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708 ||||| ||||| |||||||||||||| || ||||| || ||| || || ||||| ||| Sbjct 56447 AAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGC 56506 Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768 || | ||| | |||| | |||| || | |||||| ||| || || | ||| Sbjct 56507 ATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCC 56566 Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828 || ||| |||||||| || | ||||| ||| || || | || | | |||||| Sbjct 56567 TCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAAAGTTGATTCCTGGTCTTGGATCCAT 56626 Query 120829 TTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881 |||||||| || ||||| || || | ||| || | | | | ||||||||| Sbjct 56627 CGAATGGCCCAATCAGCCTTCTTACGGATGCAAGG-AACTGGT-GAACGCGTT 56677 >seq1640 Length=153026 Score = 125 bits (138), Expect = 7e-24 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAATG 133532 ||||| ||||| ||||||| || ||| ||||||||||||||| || || |||| Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743 Query 133533 AGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCA 133592 | ||||||||||| |||||||||||||||||||| ||||| ||||| | || Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTCG 9803 Query 133593 ACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | |||||| |||| ||||| || |||||||| || || || ||||| Sbjct 9804 ATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGAA 9862 >seq934 Length=187681 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||| || | ||| | | | || || || Sbjct 9495 AAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCA-TCTTCAAG 9437 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| | || | || |||||||| ||||||||||| |||||||| ||| Sbjct 9436 CTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGAT 9377 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||| || ||| ||| || |||| |||| ||||||||| Sbjct 9376 CTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCC 9317 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || |||||||||||||| Sbjct 9316 CGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||||| ||| ||||| || || || ||||| || | ||| ||| | || || |||| Sbjct 10017 ATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCA-TCTTCAAGCT 9959 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| || || |||||||| || || || || |||||||| ||| | Sbjct 9958 GCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-T 9900 Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 |||| || | | | || | |||||| | | || || || | |||| || || ||| Sbjct 9899 TTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCG 9840 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || |||||||||||||| Sbjct 9839 GTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 |||||| || ||||| || || ||||| | || || || |||||||||||||| Sbjct 9783 GGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCG--TCCTCGAGCTGCTTT 9726 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | |||||||| || |||||||||||||||||||| |||||| Sbjct 9725 CCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGTT 9666 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | || || | | |||||| || | |||| ||| || ||||| ||| Sbjct 9665 TTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGTAAGA 9606 Query 133641 GTTTTTAC 133648 || || || Sbjct 9605 GTCTTGAC 9598 >seq1954 Length=527115 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || |||||||| | ||| |||||||||||| ||||| Sbjct 282700 GGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCCTCGAGCTGTTTGCC 282641 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| | ||||| || |||||||| || |||||||| |||||||| | ||| Sbjct 282640 AGCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCTGGGAT 282590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483404339521760