Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq934 102 5e-17 seq1640 84.2 1e-11 >seq934 Length=187681 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || || | || | |||||| || ||| ||||| |||||||| || || Sbjct 10041 ACCACCGCGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGA 9982 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||||||| | || || | || || ||||| ||||| | ||| ||||| ||| | || Sbjct 9981 GAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGG 9922 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||||| ||||| ||| | || | ||||| ||||| | Sbjct 9921 AATTCCCTCCTTGTCTTGGATTTT-TGTTTTAACGTTATCGATCGTGTCTGAAGATTCAA 9863 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || || || || || || ||||||||| Sbjct 9862 CTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATA 9813 >seq1640 Length=153026 Score = 84.2 bits (92), Expect = 1e-11 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 || || || || |||||| | |||||| |||| || | || ||||||||||||||| Sbjct 9684 TTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAATC 9743 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGT 33680 ||||||||||| || | || | ||||| ||||| ||| || || || |||| || Sbjct 9744 AAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTT--GACATTGT 9801 Query 33681 C-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAA 33739 | | |||||||| || ||||| || | ||||| || || || || | || || || | Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 9861 Query 33740 AG 33741 || Sbjct 9862 AG 9863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328693087438080