Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1636 154 1e-32 seq2071 104 2e-17 >seq1636 Length=1555 Score = 154 bits (170), Expect = 1e-32 Identities = 370/559 (66%), Gaps = 32/559 (6%) Strand=Plus/Plus Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300 ||||||| || |||||||| ||| ||||||| | ||||| || | ||| |||| |||| Sbjct 641 TCTTCGGCCACCAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAGA 700 Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360 | ||||| ||| |||||||||||||| | ||||||||||| ||||| || ||| Sbjct 701 AACTGCACCTGCGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAACG 760 Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420 | | || || |||| ||| |||| |||||||| |||||||| |||| || Sbjct 761 TGCGCTGGCTGCAGGATCGCAAGGTCAGCATCTGGGACGAATGGGCGGATGAGGCGGGTG 820 Query 142421 ACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAG 142480 | ||||| || || || |||||||| ||| || || | || || ||| Sbjct 821 ATCTCGGCCCGGTGTATGGCAAGCAATGG----------CGCGACTGGGTGACGGCGGA- 869 Query 142481 ATGACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACTTGAAGAAGT 142540 | || ||| ||||| |||||| || | | ||| | |||| Sbjct 870 CGGCCGGCAC----------ATCGACCAGATCAAGGGGCTGGTGCACGACATCAAGACCA 919 Query 142541 CTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGG 142600 || || || || || ||||||||||| |||||||| | || || ||| ||||| Sbjct 920 ACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCACGCCATGG 979 Query 142601 CACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCAT 142660 | || | |||||||| ||||||| | | |||| |||| || ||||| Sbjct 980 CGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCG---CGAACGGCCGGCTGTCGC 1036 Query 142661 GCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGT 142720 || || || ||||| ||||| ||| ||||| ||||| ||||||||||| || | Sbjct 1037 TGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCT 1096 Query 142721 ACGCGCTTCTCACACAGCTCATTGCTCGCG----AATGCGGTCTGGAACTCGGAGACTTC 142776 | ||||| ||||| || || |||| ||| ||||||| ||||| | || || ||| Sbjct 1097 ATGCGCTGCTCACCCA---CA-TGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTC 1152 Query 142777 GTCCACACCTTCGGCAATT 142795 || ||| |||| ||| Sbjct 1153 ATCTGGACCGGCGGCGATT 1171 >seq2071 Length=31734 Score = 104 bits (114), Expect = 2e-17 Identities = 364/567 (64%), Gaps = 30/567 (5%) Strand=Plus/Minus Query 142243 TTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAG 142302 ||||| | |||||||| ||| | ||| | ||||| || || | |||| |||||| Sbjct 12019 TTCGGCTACCAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAG 11960 Query 142303 CTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATC 142362 | || ||||| || |||||| ||| || ||||||||||| | ||| | ||| | Sbjct 11959 GTCCACCTGAAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAAC 11900 Query 142363 AAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAAC 142422 || | || | ||| | | ||| | |||||||| |||||||| | | ||| || Sbjct 11899 AACAAGCTGCGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGAC 11840 Query 142423 CTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGAACCTCGTTGTCGCTGGAGAT 142482 || || || || |||||| ||||||| |||| ||| | || | || Sbjct 11839 CTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCG-------- 11788 Query 142483 GACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTACTGACT-TGAAGAAGTC 142541 | |||| |||| |||||| |||| | | | ||| | ||| Sbjct 11787 ---GGCACA----------TCGACCAGATC-GCCGAAGCGGTGAAGACCATCAAGGCCAA 11742 Query 142542 TCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGAAGTCGACGACATGGC 142601 ||| | || || || |||||||| ||| |||||| || || || | ||||| Sbjct 11741 TCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGC 11682 Query 142602 ACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAAG--AAGCGTCTGTCA 142659 || | || || ||| | | ||||| ||| |||||| || | |||| |||| Sbjct 11681 GCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCG--GACGGCAAGC---TGTCG 11627 Query 142660 TGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCG 142719 ||||||||||| ||||| || ||| ||||| ||||| ||||||||||| || Sbjct 11626 TGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGC 11567 Query 142720 TACGCGCTTCTCACACAGCTCATTGCTCGCGAATGCGGTCTGGAACTCGGAGACTTCGTC 142779 |||||||| ||||| || | || || | | |||| |||| |||| |||||| || Sbjct 11566 TACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATC 11507 Query 142780 CACACCTTCGGCAATTCGCACATCTAC 142806 ||| |||| | | ||||||||| Sbjct 11506 TGGACCGGCGGCGACTGCCACATCTAC 11480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500482158002240