Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 114 1e-20
seq934 89.7 5e-13
>seq2528
Length=594046
Score = 114 bits (126), Expect = 1e-20
Identities = 347/531 (65%), Gaps = 9/531 (2%)
Strand=Plus/Minus
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
|||| |||| |||||||||||||| |||| ||| | |||||| || || || |
Sbjct 61274 AGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCAC 61215
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
||||||| |||| ||| | ||||||| || || || | |||||| | ||| | |
Sbjct 61214 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAG 61155
Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060
| ||| || || || | | ||| ||| || | ||| || |||| |
Sbjct 61154 AGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGAC 61095
Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGC 148117
|||| || || || || ||| || || ||| ||| | | || |||||| |
Sbjct 61094 CAATACCACCAGCTGT-CTTGGAAAT--CAGTGCACAGGTTTTGAGCGTATCGTAGATAC 61038
Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177
| ||||| || || | || | | | | | ||||| || |||||| || | |
Sbjct 61037 CTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAG 60978
Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237
||||||| |||||| |||||| ||||| || || |||||||| ||||| |
Sbjct 60977 TTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGT 60918
Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297
| || ||||| || | || ||||| ||||||||||| || | ||| || ||||| | ||
Sbjct 60917 AAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCA 60858
Query 148298 TGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGG 148357
||||||| || || |||||||| | |||||| | ||||| || || |
Sbjct 60857 TGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTG 60798
Query 148358 TTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| ||| | ||||| || | ||| | |||||| | |||||| | || ||||
Sbjct 60797 TCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCG 60747
>seq934
Length=187681
Score = 89.7 bits (98), Expect = 5e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | |||||| || | | ||||||| || |||||||||||||| | ||
Sbjct 9511 ACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGT 9452
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||||||||| | |||| | || || || || ||||| |||||
Sbjct 9451 GCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCC 9392
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080
|| || || | | || || | ||| | || | ||||| | | ||| || ||||
Sbjct 9391 CTCCTTGTC-CTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGA 9333
Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| || || ||||| || | ||||||||||||
Sbjct 9332 GAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 86.0 bits (94), Expect = 6e-12
Identities = 156/224 (70%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| ||| | || | ||||| | | ||||| ||||||||||||||||| | | ||
Sbjct 10034 CGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TGAGAGTG 9977
Query 131963 CGCGA--ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020
|||| |||||| ||||| || |||| | |||||||| || || ||||| || || |
Sbjct 9976 TGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTC 9917
Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGT-TCCACAGTATCGGTCGGCTCCACTTCG 132079
| || || || |||||| |||| ||| | || | || || | | || |||||
Sbjct 9916 CCTCCTTGTCTTGGATTTTT-GTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCA 9858
Query 132080 ACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || | || || || |||| || || | ||||||||||||
Sbjct 9857 AGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476594971388640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |