Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2528 114 1e-20 seq934 89.7 5e-13 >seq2528 Length=594046 Score = 114 bits (126), Expect = 1e-20 Identities = 347/531 (65%), Gaps = 9/531 (2%) Strand=Plus/Minus Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 |||| |||| |||||||||||||| |||| ||| | |||||| || || || | Sbjct 61274 AGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCAC 61215 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 ||||||| |||| ||| | ||||||| || || || | |||||| | ||| | | Sbjct 61214 CCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAG 61155 Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 | ||| || || || | | ||| ||| || | ||| || |||| | Sbjct 61154 AGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTACATTAAGAC 61095 Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGC 148117 |||| || || || || ||| || || ||| ||| | | || |||||| | Sbjct 61094 CAATACCACCAGCTGT-CTTGGAAAT--CAGTGCACAGGTTTTGAGCGTATCGTAGATAC 61038 Query 148118 CGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCG 148177 | ||||| || || | || | | | | | ||||| || |||||| || | | Sbjct 61037 CTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAG 60978 Query 148178 TTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT 148237 ||||||| |||||| |||||| ||||| || || |||||||| ||||| | Sbjct 60977 TTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGT 60918 Query 148238 ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCA 148297 | || ||||| || | || ||||| ||||||||||| || | ||| || ||||| | || Sbjct 60917 AAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAATCA 60858 Query 148298 TGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGG 148357 ||||||| || || |||||||| | |||||| | ||||| || || | Sbjct 60857 TGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTG 60798 Query 148358 TTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | ||| | ||||| || | ||| | |||||| | |||||| | || |||| Sbjct 60797 TCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCG 60747 >seq934 Length=187681 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | |||||| || | | ||||||| || |||||||||||||| | || Sbjct 9511 ACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGT 9452 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||||||||| | |||| | || || || || ||||| ||||| Sbjct 9451 GCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCC 9392 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080 || || || | | || || | ||| | || | ||||| | | ||| || |||| Sbjct 9391 CTCCTTGTC-CTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGA 9333 Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||| || || ||||| || | |||||||||||| Sbjct 9332 GAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 86.0 bits (94), Expect = 6e-12 Identities = 156/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||| | || | ||||| | | ||||| ||||||||||||||||| | | || Sbjct 10034 CGCAGGCGAAGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTC--TGAGAGTG 9977 Query 131963 CGCGA--ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| |||||| ||||| || |||| | |||||||| || || ||||| || || | Sbjct 9976 TGCGACCATCTTCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTC 9917 Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGT-TCCACAGTATCGGTCGGCTCCACTTCG 132079 | || || || |||||| |||| ||| | || | || || | | || ||||| Sbjct 9916 CCTCCTTGTCTTGGATTTTT-GTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCA 9858 Query 132080 ACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || | || || || |||| || || | |||||||||||| Sbjct 9857 AGTGTGATTGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476594971388640