Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq435 107 3e-17 seq1961 86.0 9e-11 >seq435 Length=10274 Score = 107 bits (118), Expect = 3e-17 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 165753 GACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAG 165812 |||||| || ||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct 4544 GACCTGATCTCGTGGGGGGCGATCGGCGCGCGCACCACCGAGAGCCAGGTGCACCGCGAA 4603 Query 165813 ATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864 | || || | ||| || ||| || || ||||| ||| |||||||||||| Sbjct 4604 CTCGCCTCCGGCCTGTCGGCGCCGATCGGGTTCAAGAACGGCACCGACGGCA 4655 >seq1961 Length=13894 Score = 86.0 bits (94), Expect = 9e-11 Identities = 144/200 (72%), Gaps = 9/200 (5%) Strand=Plus/Plus Query 2144665 GCTCGAC-CTCGCGGGCATGGTCATGGCCAGCGACGCCTACTTTCCCTTTCCCGACGGCC 2144723 ||| ||| ||||| || | || |||||||||| || | ||| || || | |||||||| Sbjct 4521 GCTTGACGCTCGCCGGGAGCGTGGTGGCCAGCGATGCGTTCTTCCCGTTCCGCGACGGCC 4580 Query 2144724 CGAGCAAGGCCATCGCCGGCGGCGTCGTCGC-CATCGTGCAGCCGGGCGGC-TCACGCG- 2144780 | | || | | | ||||| | ||| | ||| ||||||||||||| || ||| Sbjct 4581 TGGACGTGGTGGTGGATGCCGGCGCC-TCGTGCGTCGCGCAGCCGGGCGGCAGCATGCGT 4639 Query 2144781 GCGGCGACAAGCCTCGATCGCCGTCTGCGACGAGGCCGGCGTCGCCATGGTCTTTACCGG 2144840 | ||| ||| |||||||| | ||||||| |||||| || |||||||| ||||| Sbjct 4640 GATGCG-GAAG---TGATCGCCGCCGCCGACGAGCGCGGCGTGGCGATGGTCTTCACCGG 4695 Query 2144841 CATGCGCCATTTCCGTCACT 2144860 | ||||||| ||||| |||| Sbjct 4696 CGTGCGCCACTTCCGCCACT 4715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177548465193288