Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq934 125 6e-24 seq1640 111 1e-19 >seq934 Length=187681 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || ||||||||||| ||||| ||||| || |||||||| ||||| || ||||| || ||| Sbjct 10271 TTGCCACCACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCG 10212 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || || || |||||||| ||||| || | || || ||||| | Sbjct 10211 GAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGT 10152 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTC 35685 || | | |||||| || ||| ||| ||||| |||| | | ||||| ||||| Sbjct 10151 GGGATACCCTCCTTATCTTGGATTTTTGTCTTCAC-GTTGTCGATTGTGTCTGAGGATTC 10093 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||| || || || || ||||| || ||||||||||| ||||| Sbjct 10092 GACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || | || || ||||| ||||| || || Sbjct 9481 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAA 9422 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | ||| | || |||||||||| |||||| ||| | | | Sbjct 9421 GATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATT 9362 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || || || || ||||| | ||||| ||||| ||||| | ||| ||||| Sbjct 9361 GTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCAC 9302 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 9301 GAAAATCTGCAT 9290 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 35533 ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTG 35592 ||||| ||| |||||||||||||||||| || | | || || | || || ||||| Sbjct 10017 ATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTG 9958 Query 35593 CTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 ||| || || || || | || |||||||| | |||| | ||||||||| ||| || Sbjct 9957 CTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-TT 9899 Query 35653 TTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCG 35711 ||| || | ||| | | |||||| ||||| || || | ||||| || || || | Sbjct 9898 TTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGG 9839 Query 35712 TCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || |||||||| Sbjct 9838 TCAAGGTCTTGACGAAAATCTGCAT 9814 >seq1640 Length=153026 Score = 111 bits (122), Expect = 1e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| ||||| || |||||| |||||| || |||| || |||||||| || ||||| | Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||| | ||| | || ||||||||| ||||| ||| | | | Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGT 9801 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| |||||||| | ||||| || || || || Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGT 9847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450778250477920