Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq559 376 1e-99 >seq559 Length=35318 Score = 376 bits (416), Expect = 1e-99 Identities = 603/852 (71%), Gaps = 28/852 (3%) Strand=Plus/Plus Query 45029 CAAGTTCAACGACCTCATCCAAAGCTTGCACCGGATCCAGCGGTTCGGCCAAACCCACCC 45088 ||||||||||||| ||||||| | |||||| ||||||| ||| || | ||||| Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 45089 CTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCATCCGCGA 45148 | | | | | |||||| ||||||| || ||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 45149 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATCCACGAGTATGG 45208 ||| ||||| | ||| ||| ||| | ||| || ||||||| ||| ||||| Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 45209 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGAACGCATCG 45267 || | | || | | |||| ||||| | ||||| ||||| ||| || | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 45268 AAGCCTCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAACCAACAGCA 45327 | | | | ||||| |||||| | | || ||||||||||||| || | | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 45328 TGGCAGACAATTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 45387 ||| || ||||| ||||||||||||||| ||| |||||| |||||||||||||| Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 45388 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 45447 ||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||| Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 45448 TGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGGCGGATCTACGCCTG-- 45505 |||| | || |||||| | ||||| || || ||||| || ||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 45506 -CCATGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGGCGTTCCCACCGTCT 45564 ||| || |||||||| ||| ||||||| || ||||||| || || || |||||| Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 45565 CCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 45621 |||||||||||| || ||| ||| ||| ||||||||| | | | | | Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246 Query 45622 GCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 45681 ||||||||| ||| |||||||| || ||||| || ||||||||||| ||||| ||| | Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303 Query 45682 GGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGTT 45737 || | ||| || ||| || |||| ||| ||||||||| ||| ||| |||||||| Sbjct 25304 CGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 45738 CTGTTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACCCCCGTCACC 45797 ||| || | | ||| ||||| | ||| | || || || |||||||| || |||||| Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 45798 AAATCCAAGGACGA---CTACACCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGG 45854 || || | ||| ||||| || || || |||||||| ||||| ||||| |||||| Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479 Query 45855 CGCTCGAGCGGC 45866 ||||| |||||| Sbjct 25480 CGCTCCAGCGGC 25491 Score = 318 bits (352), Expect = 2e-82 Identities = 329/428 (77%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 44199 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44258 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 44259 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCAGTCG 44318 |||||| || |||||||||||| | || |||||||||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 44319 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 44378 ||||| ||| ||||| | |||||| ||||| | ||||| |||||||| |||||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 44379 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 44438 ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 44439 GCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 44498 |||||||| || | ||||| || || | ||||||| | | ||||||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 44499 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACCTGGGCGGCGTTCGTGCAATCCCCG 44558 || || ||||| |||||||||||||||||||| | |||||| | ||| |||| |||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 44559 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 44615 |||||||| ||| |||| ||||||||| ||||| |||| ||| ||| Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200 Query 44616 CATGAGGT 44623 || ||||| Sbjct 23201 CACGAGGT 23208 Score = 105 bits (116), Expect = 3e-18 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 47120 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 47179 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956 Query 47180 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 47237 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013 Query 47238 -GGTCGGCGCGGC 47249 ||||| |||||| Sbjct 26014 CGGTCGCCGCGGC 26026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192784163712536