Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_026588.1
Length=60285
Score E
Sequences producing significant alignments: (Bits) Value
seq559 376 1e-99
>seq559
Length=35318
Score = 376 bits (416), Expect = 1e-99
Identities = 603/852 (71%), Gaps = 28/852 (3%)
Strand=Plus/Plus
Query 45029 CAAGTTCAACGACCTCATCCAAAGCTTGCACCGGATCCAGCGGTTCGGCCAAACCCACCC 45088
||||||||||||| ||||||| | |||||| ||||||| ||| || | |||||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713
Query 45089 CTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCATCCGCGA 45148
| | | | | |||||| ||||||| || ||||| || ||||| | | | | |
Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773
Query 45149 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATCCACGAGTATGG 45208
||| ||||| | ||| ||| ||| | ||| || ||||||| ||| |||||
Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833
Query 45209 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGAACGCATCG 45267
|| | | || | | |||| ||||| | ||||| ||||| ||| || |
Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892
Query 45268 AAGCCTCCGGCGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAACCAACAGCA 45327
| | | | ||||| |||||| | | || ||||||||||||| || | | |
Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952
Query 45328 TGGCAGACAATTCGGTGGACCTGATCGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 45387
||| || ||||| ||||||||||||||| ||| |||||| ||||||||||||||
Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012
Query 45388 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 45447
||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||
Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072
Query 45448 TGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGGCGGATCTACGCCTG-- 45505
|||| | || |||||| | ||||| || || ||||| || ||| | ||||||
Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129
Query 45506 -CCATGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCAGGCGTTCCCACCGTCT 45564
||| || |||||||| ||| ||||||| || ||||||| || || || ||||||
Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189
Query 45565 CCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 45621
|||||||||||| || ||| ||| ||| ||||||||| | | | | |
Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246
Query 45622 GCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 45681
||||||||| ||| |||||||| || ||||| || ||||||||||| ||||| ||| |
Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303
Query 45682 GGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGTT 45737
|| | ||| || ||| || |||| ||| ||||||||| ||| ||| ||||||||
Sbjct 25304 CGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362
Query 45738 CTGTTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACCCCCGTCACC 45797
||| || | | ||| ||||| | ||| | || || || |||||||| || ||||||
Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422
Query 45798 AAATCCAAGGACGA---CTACACCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGG 45854
|| || | ||| ||||| || || || |||||||| ||||| ||||| ||||||
Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479
Query 45855 CGCTCGAGCGGC 45866
||||| ||||||
Sbjct 25480 CGCTCCAGCGGC 25491
Score = 318 bits (352), Expect = 2e-82
Identities = 329/428 (77%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 44199 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44258
|||| || ||||| || ||||| ||||||||||| ||| | ||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 44259 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCAGTCG 44318
|||||| || |||||||||||| | || |||||||||||||| ||||||| |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 44319 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 44378
||||| ||| ||||| | |||||| ||||| | ||||| |||||||| ||||||||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 44379 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 44438
||||| ||||||||||||||||| ||||| || | ||||| ||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 44439 GCGCTCACGCGTTGGTTCCAACGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 44498
|||||||| || | ||||| || || | ||||||| | | |||||||||||||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083
Query 44499 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACCTGGGCGGCGTTCGTGCAATCCCCG 44558
|| || ||||| |||||||||||||||||||| | |||||| | ||| |||| ||||
Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143
Query 44559 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 44615
|||||||| ||| |||| ||||||||| ||||| |||| ||| |||
Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200
Query 44616 CATGAGGT 44623
|| |||||
Sbjct 23201 CACGAGGT 23208
Score = 105 bits (116), Expect = 3e-18
Identities = 104/133 (78%), Gaps = 6/133 (5%)
Strand=Plus/Plus
Query 47120 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 47179
||||||| | |||||||||||||| |||||||||||| || | ||| | | |||||
Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956
Query 47180 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 47237
| |||||||||| |||||| |||| || |||||||||||| |||| || || |||
Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013
Query 47238 -GGTCGGCGCGGC 47249
||||| ||||||
Sbjct 26014 CGGTCGCCGCGGC 26026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 192784163712536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |