Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026593.1 Length=59419 Score E Sequences producing significant alignments: (Bits) Value seq559 354 3e-93 >seq559 Length=35318 Score = 354 bits (392), Expect = 3e-93 Identities = 598/852 (70%), Gaps = 28/852 (3%) Strand=Plus/Plus Query 45139 CAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCACCC 45198 ||||||||||||| | |||||| | |||||| | ||||| ||| || | ||||| Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 45199 CTGTACAGCCC-ATTTGATCCATTCCGAGACCGAACGGGAAGTGGTTCGCATCATCCGCG 45257 || || | | | ||||| |||| || || ||||| || || ||| | | | | Sbjct 24714 G-GTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 45258 AGAAATGGGCCCAGCACAGAGAGCTGACATCAACTATGACTGACATAATCCACGAATACG 45317 ||| ||||| | ||| ||||||| | ||| | || || |||| |||||| | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 45318 GGCTTGACCCCGAGG-CAATCTCGGAAGCGCTGCAACGGTCCATCGGATGCGAACGAATC 45376 | || | | || | | ||||| ||||| | || || ||||| ||| || Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 45377 GAAGCATCCGGTGAGGGCTGGCTGTTCGCCAACAACGACTGCGTACCCGAAACCGAGAGA 45436 || | | || || |||||| | | || ||||||||||||| || | | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 45437 ATGGCAGACGATTCGGTGGATCTGATTGTCACCAGTATTCCGTTCTCCAACCACTACGAA 45496 ||| || | ||||| || ||||| |||||| || |||||| |||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 45497 TACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCCCATTTCTGGGCGCAG 45556 |||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 45557 ATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG- 45615 ||||| | || |||||| | ||||| || || ||||||||||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 45616 --CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGTTCCCACCGTC 45673 |||||| |||||||| ||| ||||||| || ||||||| || || || |||||| Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 45674 TCCCCGTTCCACGCCGAGGCGATCTTTCAC---GGCCGCAAACACGGCTTCGACTACCTC 45730 |||||||||||| || ||| ||| ||| ||||||||| | | | | Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 45731 GGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 45790 |||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 45791 TGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGTT 45847 | || | | | ||| || |||| ||| ||||||||| ||| ||| |||||||| Sbjct 25303 TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 45848 CTGCTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACCCCCGTCACC 45907 |||||| | | ||| ||||| | ||| | || || || |||||||| || |||||| Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 45908 AAATCCAAGGACGA---CTACAGCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGG 45964 || || | ||| |||||||| || || |||||||| ||||| ||||| |||||| Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479 Query 45965 CGCTCGAGCGGC 45976 ||||| |||||| Sbjct 25480 CGCTCCAGCGGC 25491 Score = 255 bits (282), Expect = 2e-63 Identities = 317/430 (74%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 44309 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44368 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 44369 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 44428 |||||| || || ||||| ||| | | || || |||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 44429 TTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 44488 ||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 44489 AACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACCGGCGCG 44548 ||||| |||||||||||||| || ||||| |||| ||||| ||||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 44549 GCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTCTACCCA 44608 || ||||| | | |||||||| ||||| |||||| | || ||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 44609 CATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA-ATCCCC 44667 || || || | || |||||||| ||||| |||| |||||||| ||| |||| ||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 44668 AGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGTGCAGTG 44724 ||| ||||| || | ||||| |||||| || ||||| || | |||| || Sbjct 23144 AGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 44725 GCATGAGGTC 44734 ||| |||||| Sbjct 23200 GCACGAGGTC 23209 Score = 102 bits (112), Expect = 3e-17 Identities = 103/133 (77%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 47230 CTGCCCCTTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAATCCTGGCGA 47289 ||||||| | |||||||||||||| || ||||||||| || | ||| | | ||||| Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956 Query 47290 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACTT-- 47347 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013 Query 47348 -GGTCGGCGCGGC 47359 ||||| |||||| Sbjct 26014 CGGTCGCCGCGGC 26026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190013053353928