Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq559 394 4e-105 >seq559 Length=35318 Score = 394 bits (436), Expect = 4e-105 Identities = 644/912 (71%), Gaps = 32/912 (4%) Strand=Plus/Plus Query 46913 GGGCAG-GGCATGAACCTGCAGC---AGGCCCACGTCTGTGTCTACATCGGCGTCACGCA 46968 |||||| |||| |||||||||| | |||| | || | | ||||||| | || Sbjct 24594 GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGT-AGGCT 24652 Query 46969 -CAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATCCAGCGGTTCGGCCAAACCCACC 47027 ||||||||||||| | |||||| | |||||| ||||||| ||| || | |||| Sbjct 24653 TCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712 Query 47028 CTTGCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCGTCCGCG 47087 | | | | | | |||||| ||||||| || ||||| || ||||| | | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 47088 AGAAATGGGCGCAACACCGGGAGTTGACATCAACGATGACCGACATCATCTACGAGTATG 47147 ||| ||||||| ||| |||| ||| | ||| |||| |||||| ||| |||| Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 47148 GGCTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGGTGCGAACGCATC 47206 | || | | || | | |||| ||||| | ||||| ||||| ||| || Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 47207 GAAGCATCCGGCGAGGGGTGGCTGTTCGCCAACAACGACTGCGTGCCCGAAACCGAGTCG 47266 || | | ||||| || ||| | | || ||||||||||||| || | | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 47267 ATGGGCGACAGCTCGGTAGATCTGATTGTCACCAGCATTCCGTTCTCAAACCACTACGAG 47326 ||| ||| | ||||| || ||||| |||||| ||| |||||| |||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 47327 TACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 47386 |||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 47387 ATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCCCGGGCGGATCTACGCCTG- 47445 ||||| | || |||||| | ||||| || || ||||| || ||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 47446 --CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGTTCCCACCGTC 47503 |||||| |||||||| ||| ||||||| || ||||||| || || || |||||| Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 47504 TCCCCGTTCCACGCCGAGGCGATCTTTCAC---GGCCGCAAACACGGCTTCGACTACCTC 47560 |||||||||||| || ||| ||| ||| ||||||||| | | | | Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 47561 GGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 47620 |||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 47621 TGGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGCGTTGGCTCCCCGGAATACGTT 47677 | || | | | ||| || |||| ||| ||||||||| ||| ||| |||||||| Sbjct 25303 TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 47678 CTGCTGTTCCACAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACCCCCGTCACC 47737 |||||| | | ||| ||||| | ||| | || || || |||||||| || |||||| Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 47738 AAATCCAAGGACGA---CTACAGCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGG 47794 || || | ||| |||||||| || || |||||||| ||||| ||||| |||||| Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479 Query 47795 CGCTCGAGCGGC 47806 ||||| |||||| Sbjct 25480 CGCTCCAGCGGC 25491 Score = 298 bits (330), Expect = 2e-76 Identities = 327/429 (76%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 46139 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTTACG 46198 |||| ||| ||||| ||||||||||| ||||| || ||| ||||| ||| || || Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 46199 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACCTACCAGTCG 46258 |||||| || |||||||||||| | || |||||||||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 46259 TTCCTAGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 46318 ||||| ||| ||||| |||||||| ||||| | ||||| |||||||| |||||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 46319 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTAATGGACACCGGTGCG 46378 ||||| ||||||||||||||||| ||||| || | ||||| || ||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 46379 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCC 46437 |||||||| || | |||||||| || ||| |||||| | | |||||||| ||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082 Query 46438 CCACAAGGAGCGCGAGTTCTTCTTGTGGCTCAACACCTGGGCCGCGTTCGTGCAATCCCC 46497 |||||||| | ||||||| ||||||| || | |||||||| ||| |||| ||| Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142 Query 46498 GGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGCTGTG 46554 | |||||||| ||| |||| |||||| || ||||| |||| |||| || Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 46555 GCATGAGGT 46563 ||| ||||| Sbjct 23200 GCACGAGGT 23208 Score = 118 bits (130), Expect = 4e-22 Identities = 202/287 (70%), Gaps = 22/287 (8%) Strand=Plus/Plus Query 47947 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCGCC-TC---ACGTGTGG 48001 |||||| ||| |||||||| ||||| ||||| | | | || || |||||||| Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831 Query 48002 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTTCAA 48058 ||||| | |||||| || | ||||| |||||| |||||| || | Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888 Query 48059 ATGCACGTGTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATAACCCGGTTCTCGAAT 48118 | |||||| |||||| | |||||||||||||| ||||||||||| || | ||| | Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948 Query 48119 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 48178 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005 Query 48179 AAACTT---GGTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 48222 | ||| ||||| |||||| || ||| || || |||| ||| Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202537275792380