Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_026604.1
Length=53636
Score E
Sequences producing significant alignments: (Bits) Value
seq559 336 7e-88
>seq559
Length=35318
Score = 336 bits (372), Expect = 7e-88
Identities = 592/851 (70%), Gaps = 26/851 (3%)
Strand=Plus/Plus
Query 40706 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 40765
|||||||||||| | |||||| | |||||| | ||||| ||| || | || ||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713
Query 40766 CTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 40825
| | | | | |||||| |||| || |||||||| || ||||| | | | | |
Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773
Query 40826 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACGG 40885
||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || ||
Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833
Query 40886 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGTGAGCGCATCG 40944
|| | | || | | |||| ||||| | ||||| ||||| ||||| |
Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892
Query 40945 AAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTCACGAAACCGAGAGAA 41004
| | | || || || ||| | | | ||||||||||||| | || | | |
Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952
Query 41005 TGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCTCCAACCACTACGAGT 41064
||| || | ||||| || ||||| ||||| ||| |||||| ||||||||||||||
Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012
Query 41065 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 41124
||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||
Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072
Query 41125 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG-- 41182
|||| | || || ||| | ||||| || || ||||||||||| | ||||||
Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129
Query 41183 -CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTGT 41241
|||||| |||||||| ||| ||||||| || ||||||| || ||||| || ||
Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189
Query 41242 CCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 41298
|||||||||||| || ||| ||| ||| ||||||||| | | | | |
Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246
Query 41299 GCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 41358
||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| |
Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303
Query 41359 GGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACATTC 41415
|| | | | ||| || |||| ||| |||||||| |||| ||| |||||| | |
Sbjct 25304 CGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGC 25363
Query 41416 TGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCA 41475
||||| | | ||| ||||||| ||| | || || || |||||||| || |||||||
Sbjct 25364 TGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCA 25423
Query 41476 AATCCAAGGACGA---ATACACCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGGC 41532
| || | ||| |||| || || || |||||||| ||||| ||||| |||||||
Sbjct 25424 A--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGC 25480
Query 41533 GCTCGAGCGGC 41543
|||| ||||||
Sbjct 25481 GCTCCAGCGGC 25491
Score = 255 bits (282), Expect = 2e-63
Identities = 317/430 (74%), Gaps = 8/430 (2%)
Strand=Plus/Plus
Query 39876 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 39935
|||| || ||||| || ||||| ||||||||||| ||| | ||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 39936 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 39995
|||||| || || ||||| ||| | | || || |||||||| ||||||| |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 39996 TTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 40055
||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || || ||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 40056 AACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACCGGCGCG 40115
||||| |||||||||||||| || ||||| |||| ||||| |||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 40116 GCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTCTACCCA 40175
|| ||||| | | |||||||| ||||| |||||| | || |||||||||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083
Query 40176 CATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA-ATCCCC 40234
|| || || | || |||||||| ||||| |||| |||||||| ||| |||| |||
Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143
Query 40235 AGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGTGCAGTG 40291
||| ||||| || | ||||| |||||| || ||||| || | |||| ||
Sbjct 23144 AGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199
Query 40292 GCATGAGGTC 40301
||| ||||||
Sbjct 23200 GCACGAGGTC 23209
Score = 127 bits (140), Expect = 7e-25
Identities = 198/277 (71%), Gaps = 22/277 (8%)
Strand=Plus/Plus
Query 41694 ACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGA 41748
|| |||||||| ||||| ||||| | | |||| || |||||||| ||||| |
Sbjct 25787 ACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGGGACGACATCG 25841
Query 41749 ACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGT 41805
|||||| || | ||||| |||||| |||||| || | | | ||| || |
Sbjct 25842 TGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAGAAGCACGTCT 25898
Query 41806 GCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGT 41865
||||||| |||||||||||||| |||||||||||| || | ||| | | ||||||
Sbjct 25899 GCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGC 25958
Query 41866 TGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CG 41922
|||||||||| |||||| |||| || |||||||||||| |||| || || || ||
Sbjct 25959 TGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCG 26015
Query 41923 GTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 41959
|||| |||||| || ||| || || |||| |||
Sbjct 26016 GTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 171508051963824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |