Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_026604.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq559 336 7e-88 >seq559 Length=35318 Score = 336 bits (372), Expect = 7e-88 Identities = 592/851 (70%), Gaps = 26/851 (3%) Strand=Plus/Plus Query 40706 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 40765 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 40766 CTGCACAGCCCATTTGATCCACTCCGAGACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 40825 | | | | | |||||| |||| || |||||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 40826 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACGG 40885 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || || Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 40886 ACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGTGAGCGCATCG 40944 || | | || | | |||| ||||| | ||||| ||||| ||||| | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 40945 AAGCATCCGGTGAGGGATGGGTGTTCGTCAACAACGACTGCGTTCACGAAACCGAGAGAA 41004 | | | || || || ||| | | | ||||||||||||| | || | | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 41005 TGGCAGACGATTCGGTGGATCTGATTGTCACTAGCATTCCGTTCTCCAACCACTACGAGT 41064 ||| || | ||||| || ||||| ||||| ||| |||||| |||||||||||||| Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 41065 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGA 41124 ||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||| Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 41125 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG-- 41182 |||| | || || ||| | ||||| || || ||||||||||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 41183 -CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTGT 41241 |||||| |||||||| ||| ||||||| || ||||||| || ||||| || || Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 41242 CCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTCG 41298 |||||||||||| || ||| ||| ||| ||||||||| | | | | | Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATGG 25246 Query 41299 GCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCT 41358 ||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| | Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---T 25303 Query 41359 GGT-CGGAGCAGTGC--AAAGACGCCACCAAGATGGGTGTCGGCTCCCCGGAATACATTC 41415 || | | | ||| || |||| ||| |||||||| |||| ||| |||||| | | Sbjct 25304 CGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGC 25363 Query 41416 TGCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCA 41475 ||||| | | ||| ||||||| ||| | || || || |||||||| || ||||||| Sbjct 25364 TGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCA 25423 Query 41476 AATCCAAGGACGA---ATACACCCGTGCCCGATGGCAGGTGGACGCGCACGCGTTCTGGC 41532 | || | ||| |||| || || || |||||||| ||||| ||||| ||||||| Sbjct 25424 A--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGC 25480 Query 41533 GCTCGAGCGGC 41543 |||| |||||| Sbjct 25481 GCTCCAGCGGC 25491 Score = 255 bits (282), Expect = 2e-63 Identities = 317/430 (74%), Gaps = 8/430 (2%) Strand=Plus/Plus Query 39876 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 39935 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 39936 GCCGTCTCACTCGATGAGGCCAGCGTGTTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 39995 |||||| || || ||||| ||| | | || || |||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 39996 TTCCTAGAGCTGTTCGACGCGGTTCCCTACCGGTACGTCGCGACGGCCACGCCGTCACCG 40055 ||||| ||| ||||| ||||| || ||||| | |||||||| ||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 40056 AACCGGTACAAGGAGCTGATTCACTACGCGGGTTATCTCGGGGTGATGGACACCGGCGCG 40115 ||||| |||||||||||||| || ||||| |||| ||||| ||||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 40116 GCTCTCACTAGGTGGTTCCAGCGGGACAGCACCAAGGCGAATAACCTAACCCTCTACCCA 40175 || ||||| | | |||||||| ||||| |||||| | || ||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 40176 CATAAAGAGCGCGAATTCTGGCTTTGGCTCAATACCTGGGCCGCGTTCGTGCA-ATCCCC 40234 || || || | || |||||||| ||||| |||| |||||||| ||| |||| ||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 40235 AGCTGACCTGGGTT---ATGACGCCACCGGCTATGACCTGCCGCCGTTGGATGTGCAGTG 40291 ||| ||||| || | ||||| |||||| || ||||| || | |||| || Sbjct 23144 AGC-GACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 40292 GCATGAGGTC 40301 ||| |||||| Sbjct 23200 GCACGAGGTC 23209 Score = 127 bits (140), Expect = 7e-25 Identities = 198/277 (71%), Gaps = 22/277 (8%) Strand=Plus/Plus Query 41694 ACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGA 41748 || |||||||| ||||| ||||| | | |||| || |||||||| ||||| | Sbjct 25787 ACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGGGACGACATCG 25841 Query 41749 ACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGT 41805 |||||| || | ||||| |||||| |||||| || | | | ||| || | Sbjct 25842 TGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAGAAGCACGTCT 25898 Query 41806 GCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGT 41865 ||||||| |||||||||||||| |||||||||||| || | ||| | | |||||| Sbjct 25899 GCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGC 25958 Query 41866 TGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACT---CG 41922 |||||||||| |||||| |||| || |||||||||||| |||| || || || || Sbjct 25959 TGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCG 26015 Query 41923 GTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 41959 |||| |||||| || ||| || || |||| ||| Sbjct 26016 GTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171508051963824