Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq934 125 7e-24
seq1640 120 3e-22
seq1954 87.8 2e-12
>seq934
Length=187681
Score = 125 bits (138), Expect = 7e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| ||||| || || |||||||||||||||||||| | ||| || || ||
Sbjct 10022 ACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCA 9963
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || ||||| | ||| ||||| || || || || || || || |||||
Sbjct 9962 AGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGG 9903
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|||||| ||| || || | ||||| || ||||| || || || || || || ||
Sbjct 9902 ATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTT 9843
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || |||||||| |||||
Sbjct 9842 CCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 114 bits (126), Expect = 1e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||||||||| |||||||| || ||
Sbjct 9812 CCACCGCGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAG 9753
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| |||||||| || || || || ||||||||||||||||| || ||
Sbjct 9752 AGAGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGG 9693
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || ||| || || | || || || || |||||
Sbjct 9692 ATGCCTTCCTTGTCTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACT 9633
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712
|| ||||| ||||| || ||||| | ||| || || | |||| ||
Sbjct 9632 TCAAGAGTGATGGTCTTTCCGGTAAGAGTCTTGACAACTATTTTCA 9587
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || || || ||||| ||||||||||||||
Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || |||||||| || || || ||||| || ||||| || || ||
Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | || || || || ||
Sbjct 9396 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACC 9337
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| |||||||| || || | ||| || |||||||| |||||
Sbjct 9336 TCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
>seq1640
Length=153026
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| ||||| || || |||| | |||| | ||| |||||||| || || |||||||
Sbjct 9682 CCTTCTGAATATTATAATCGCTCAAGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAA 9741
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||||||||||||| || || || |||||||| || || ||||| || ||||| ||
Sbjct 9742 TCAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGT 9801
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||| ||| ||||| ||||| || || || || ||||| | || || ||||
Sbjct 9802 CGATTGTGTCGCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 9861
Query 134704 A 134704
|
Sbjct 9862 A 9862
>seq1954
Length=527115
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || ||||| ||||| || |||||||| || |
Sbjct 282729 CCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 282670
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||||||||| || || || | ||| ||||| || || ||
Sbjct 282669 AGGGTGCGGCCGTCCTCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGG 282610
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTT 134634
||||| || || ||| | || |||||
Sbjct 282609 ATGCCCTCCTTGTCTGGGATGGATTGTT 282582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505381191184480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |