Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq2061 93.3 5e-14 seq2071 89.7 6e-13 >seq2061 Length=9085 Score = 93.3 bits (102), Expect = 5e-14 Identities = 359/550 (65%), Gaps = 17/550 (3%) Strand=Plus/Plus Query 141295 GGCGCGGATTTCCCGGTATTCCTTGACGCACAAAACCGCGAACA---CGCACTCGCCCGG 141351 |||||| ||||||| || ||||| || | | | ||||| | ||| |||||||| Sbjct 7066 GGCGCG-ATTTCCCCGTTTTCCTGCACCCGGAGACGCGCGAGGAATTCGCCCTCGCCCGC 7124 Query 141352 ATCGAACGCAAGATCGGCGAA-GGCTACAAGGGATTCGAATGCGCCTTTGACACGTCGAT 141410 | ||| ||||||| ||||| |||||| | || ||| | | | || || || | Sbjct 7125 ACCGAGCGCAAGA-CGGCGCCCGGCTACCACGGGTTCAGCTTCCACGCCGATCCGGCGGT 7183 Query 141411 CACCATCGAACAAGACCTGATGCGCCGCGATCTTACCATCAACGCCATGGCAATGTTTAT 141470 ||| | || | ||||| || ||||| || ||||||||||||||||| | Sbjct 7184 CACGCTGGAGGAGGACCTCGCCCGGCGCGACCTGACCATCAACGCCATGGCCCAGGCCGG 7243 Query 141471 GGATGGTCAAGTCATCGATCCGTTCGGCGGCATGGACGATCTGAAAAACAAGGTGCTTCG 141530 ||| || || |||||||||||||| ||| | ||| || || |||||||| Sbjct 7244 GGACGGCACGGTGATCGATCCGTTCGGTGGCCGGCGCGACCTCGAAGCGCGTGTGCTTCG 7303 Query 141531 CCACGTCAATGCGGAAACCTTCAAGGAAGACCCGCTTCGCGTGCTGCGCGTTGCCCGTTT 141590 ||||||| | || | ||| || |||||| | ||| | |||||| | ||||| || Sbjct 7304 GCACGTCA---CCGATTCGTTCCGCGAGGACCCGGTGCGCATCCTGCGCCTGGCCCGCTT 7360 Query 141591 CCTTGCGCGGTGGAAGGATTTCGATGTCGCTCCGGAGACGTTCAAGCTGCTTCAGGAAAT 141650 | || ||| || | ||| |||| | ||| ||| || ||||| | | | || Sbjct 7361 CGCAGCCAGGTTCCAGCAGTTCTCGATCGCGCAGGAAACGCTCGAGCTGATGCGCGGGAT 7420 Query 141651 GGCGGCGACCGGCGAACTGAAGACCCTTCAGGCGGATCGCGTTTGGAAGGAAACGGAAAA 141710 || | | ||||||| || | | || | |||| ||||| ||| ||||| | | Sbjct 7421 GGTGCAGGCCGGCGAGGTGGACGCGCTGGTGCCGGAACGCGTCTGGCAGGAACTCGCACG 7480 Query 141711 GGCGCTGTCGGAAGAAATGCCGAGTCGCTTCTTCGTCTTCCTTC-AGA-TGATCGGCGCG 141768 | ||| ||| |||| |||| ||| | ||| | |||| | || || ||||||| Sbjct 7481 CGGTCTGATGGAGGAAAAGCCGTCGCGCATGCTCGACGTCCTGCGCGACTG--CGGCGCG 7538 Query 141769 CT-GAACGACGTGTTTCCGGAAGT-GGCGGCTCTGTTCGGGGTTCCACAACCCTACAAGT 141826 || | || | || | |||||||| | | || |||| || || || |||| | | | | Sbjct 7539 CTCGCGCGGC-TGCTGCCGGAAGTCGACCGC-CTGTGGGGCGTGCCGCAACGCGCCGACT 7596 Query 141827 ATCACCCGGA 141836 | |||||||| Sbjct 7597 ACCACCCGGA 7606 >seq2071 Length=31734 Score = 89.7 bits (98), Expect = 6e-13 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 176399 CACCTGATCGAAGTGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCC 176458 |||||| ||| ||| ||| | ||||||||| || || | | | ||| | || || Sbjct 11459 CACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAGATGAAGTCGCC 11518 Query 176459 GACTTCCAAGCCGCATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTT 176518 ||| ||| | |||| | | ||||||||| || || || || ||||| ||||||||| Sbjct 11519 GACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTT 11578 Query 176519 GAATGGAAGCCCCAAGAAGACGTC--CACGGACCGCTGATTCCAAAGGCAGGACAGTTTC 176576 ||| || | |||| ||||| ||| ||| | ||||| | | |||| ||||| || Sbjct 11579 GAACGGCACGCCCAGGAAGATGTCGGCACTG--CGCTGGTACAGCTGGCACGACAGCTTG 11636 Query 176577 CCGTTGCGGACATAGAACTGGAA-ACCGTAGTGACACGGCGGCAAAGCCAT 176626 |||| ||| ||||||||||| | || ||| || |||| || ||||| Sbjct 11637 CCGTCCGCGACGTAGAACTGGAAGAACG-CGTGGCAGGGCGCCAGCGCCAT 11686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622893989737440