Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 246 4e-60
seq2704 111 2e-19
>seq2528
Length=594046
Score = 246 bits (272), Expect = 4e-60
Identities = 599/901 (66%), Gaps = 16/901 (2%)
Strand=Plus/Minus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| || || || || |||||||| |||| || || ||||| ||||| | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| | | | | || ||| || |||||||| | ||| || |||| ||||| | ||||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| | | ||| ||| || ||||| ||||| ||||| | ||| || |
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAATTCGAAG 61273
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
||||| || ||||| ||||| ||||| || || | | | || ||||||||||| || |||
Sbjct 61272 ATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCACCC 61213
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | || | |||||||| || |||| | ||||| || || || || |||||
Sbjct 61212 TGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTAGAG 61153
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA----TTACTAATAGATAG 69872
||||||||||| | ||| || || | || || ||| ||| | || ||
Sbjct 61152 GAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC-ATTA---AG 61097
Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932
||| || || || || | || || || || ||||| ||| | || || || |||||
Sbjct 61096 ACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGATACC 61037
Query 69933 CTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGT 69992
|| || ||||| || |||||| | || |||||| | |||||| | ||| |||
Sbjct 61036 TTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGGAGT 60977
Query 69993 TCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTA 70052
|||||| || || | || ||||| ||||||||||| |||||| || | || ||||||
Sbjct 60976 TCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATTGTA 60917
Query 70053 TGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACA 70111
|||||||| || || || ||| | | | ||||| || | ||| || ||||| | ||
Sbjct 60916 AGTTTCAATCGCCTTCTCAATGTCCTCGCCG-TGAATACCAACCGCAACCCGCATAATCA 60858
Query 70112 TATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAG 70171
| ||||| || || || | || ||| || |||||| || || || || |
Sbjct 60857 TGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAGTG 60798
Query 70172 TTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTT 70231
| || || |||||||| | ||| ||| || | ||||||| |||| | || || || |
Sbjct 60797 TCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAGCT 60738
Query 70232 TATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGAT---CGTT 70288
|| | || |||| || || | | | ||||| || || | | || |
Sbjct 60737 CGTCAGCGTGCTTCATAACAATTTCGTAAGTTTTTTGAGAGATCATAGGTGCTGGGCGGT 60678
Query 70289 TACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGttttt 70348
| || || || || || || | | | ||| || || || | ||| ||||||
Sbjct 60677 T---GTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTTTT 60621
Query 70349 ttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGAT 70408
| || | ||| || | || |||| |||||||||||| || || || |||||||| ||||
Sbjct 60620 TCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGGAT 60561
Query 70409 G 70409
|
Sbjct 60560 G 60560
>seq2704
Length=633058
Score = 111 bits (122), Expect = 2e-19
Identities = 335/514 (65%), Gaps = 5/514 (1%)
Strand=Plus/Plus
Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372
|||||| || || ||||| || || ||||| ||||| || || || || || ||
Sbjct 56137 CATAACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGA 56196
Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432
|| || || || |||||||| || || || || || |||||||| | || ||| ||
Sbjct 56197 CAGCGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACC 56256
Query 39433 TAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATT 39492
| | || ||| || || || ||||| || |||||| ||| | || | ||
Sbjct 56257 AAGAGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTT 56316
Query 39493 CATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGC 39552
||| || | || || || || || || | || ||||||||||| || || ||
Sbjct 56317 CATGCCGAGAAGGGCGCAAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGC 56376
Query 39553 CTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACAT 39612
||||| || | | || ||| ||||| | || | || || |
Sbjct 56377 TTCTGTGATAACAGCCTCGACGGCCTGGGGGCTCGGGCGGTGACGAAGGTGAGAGAAGAG 56436
Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672
| ||||| |||||| || |||||||| || | ||| | ||| || || || ||
Sbjct 56437 AAGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGT 56496
Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAA 39732
||| |||||||| || |||||||| || ||||| || || | |||||||| ||| ||
Sbjct 56497 GAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAA 56556
Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATG 39792
||||| || || || |||||||| |||||||| | || | || ||| || | |
Sbjct 56557 AAAGATACCCTCAACGGCTGCAAAGGCAACAAGGCGCTGGGCAAAAGTTGATTCCTGGTC 56616
Query 39793 T---ATCCA-CTTCTGTGCCCAATCAGCTTTCTT 39822
| ||||| | || ||||||||||| |||||
Sbjct 56617 TTGGATCCATCGAATG-GCCCAATCAGCCTTCTT 56649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686885410755360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |