Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_027348.1
Length=73990
Score E
Sequences producing significant alignments: (Bits) Value
seq1636 125 3e-24
seq2071 118 5e-22
>seq1636
Length=1555
Score = 125 bits (138), Expect = 3e-24
Identities = 140/183 (77%), Gaps = 8/183 (4%)
Strand=Plus/Plus
Query 21953 GCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCA 22012
||||||| ||||| |||||| || ||||| ||||| |||||||| |||||||||||||
Sbjct 1035 GCTGCAA-CTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCA 1093
Query 22013 GCTACGCGCTGCTGACGCACCTCATGGCG--GCCACGGTCGGCATGCAGGCCGAGAAGTT 22070
|||| |||||||| || ||| | ||||| || | | ||| || || | | ||||
Sbjct 1094 GCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATG--CGGGCTGGAGCCGGGCGAGTT 1151
Query 22071 CATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC---CAAGCA 22127
||||||| | ||||| || |||||||| || || |||||| | || ||||| | ||||
Sbjct 1152 CATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCA 1211
Query 22128 GCT 22130
|||
Sbjct 1212 GCT 1214
>seq2071
Length=31734
Score = 118 bits (130), Expect = 5e-22
Identities = 122/157 (78%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 21955 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 22014
||| | || || |||||||| || ||||| |||||||||||||| |||||||||||||||
Sbjct 11626 TGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGC 11567
Query 22015 TACGCGCTGCTGACGCACCTCATGGCGGCCACGGT-CGGCATGCAGGCCGAGAAGTTCAT 22073
|||||||| || |||||| | || || || | || || | || || || | |||||
Sbjct 11566 TACGCGCTACTCACGCACATGATCGC-GCAGCAGTGCGACCTGGCGGTCGGCGACTTCAT 11508
Query 22074 CTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCAC 22110
|||| | ||||| ||||||||| | ||| ||||||
Sbjct 11507 CTGGACCGGCGGCGACTGCCACATCTACAGCAACCAC 11471
Score = 100 bits (110), Expect = 1e-16
Identities = 278/415 (67%), Gaps = 16/415 (4%)
Strand=Plus/Minus
Query 21405 CAAGTCTGACCGCACTGGCACAGGCACCAAGTCCGTATTCGGTGCCCAGATGGAATTCGA 21464
|||| | |||||||| || || ||||| ||| ||||| ||||||| |||||
Sbjct 12056 CAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGA 11997
Query 21465 TCTGCGTGAGGGCTTCCCCCTGCT--CCAG-AAGAAGA-CCACCCCCTTCACCACGATCT 21520
||| || |||||||| ||| | ||| |||||| ||||| | | | |||
Sbjct 11996 CCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACC----TGAAATCCATCA 11941
Query 21521 TCACCGAGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCTACAGCAAAAG- 21579
|| |||||| |||| | || ||||| || | | ||| ||| | || | |
Sbjct 11940 TCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGC-GCGAGCGC 11882
Query 21580 GGC-TGCCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGG 21638
||| || | |||||||||||||||||| | || |||| ||| || ||| | || ||
Sbjct 11881 GGCGTGAC-CATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGG 11823
Query 21639 TGCCCAGTGGCGCAGCATCCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGC 21698
| |||||||||||| | ||||| || | ||||||||||| | ||| | ||
Sbjct 11822 CGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGC 11763
Query 21699 AC--AAGAGCTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAAC 21756
|||| | | | | | |||||| |||||||||||||| | |||||||||
Sbjct 11762 GGTGAAGACCATCAA--GGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAAC 11705
Query 21757 GTGGCCGAGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811
||||| || || ||||||| ||| | || ||||| ||| | ||||||||||
Sbjct 11704 GTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCT 11650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 236635343741564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |