Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq1636 125 3e-24 seq2071 118 5e-22 >seq1636 Length=1555 Score = 125 bits (138), Expect = 3e-24 Identities = 140/183 (77%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 21953 GCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCA 22012 ||||||| ||||| |||||| || ||||| ||||| |||||||| ||||||||||||| Sbjct 1035 GCTGCAA-CTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCA 1093 Query 22013 GCTACGCGCTGCTGACGCACCTCATGGCG--GCCACGGTCGGCATGCAGGCCGAGAAGTT 22070 |||| |||||||| || ||| | ||||| || | | ||| || || | | |||| Sbjct 1094 GCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATG--CGGGCTGGAGCCGGGCGAGTT 1151 Query 22071 CATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC---CAAGCA 22127 ||||||| | ||||| || |||||||| || || |||||| | || ||||| | |||| Sbjct 1152 CATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCGCGAGCA 1211 Query 22128 GCT 22130 ||| Sbjct 1212 GCT 1214 >seq2071 Length=31734 Score = 118 bits (130), Expect = 5e-22 Identities = 122/157 (78%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 21955 TGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAGC 22014 ||| | || || |||||||| || ||||| |||||||||||||| ||||||||||||||| Sbjct 11626 TGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGC 11567 Query 22015 TACGCGCTGCTGACGCACCTCATGGCGGCCACGGT-CGGCATGCAGGCCGAGAAGTTCAT 22073 |||||||| || |||||| | || || || | || || | || || || | ||||| Sbjct 11566 TACGCGCTACTCACGCACATGATCGC-GCAGCAGTGCGACCTGGCGGTCGGCGACTTCAT 11508 Query 22074 CTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCAC 22110 |||| | ||||| ||||||||| | ||| |||||| Sbjct 11507 CTGGACCGGCGGCGACTGCCACATCTACAGCAACCAC 11471 Score = 100 bits (110), Expect = 1e-16 Identities = 278/415 (67%), Gaps = 16/415 (4%) Strand=Plus/Minus Query 21405 CAAGTCTGACCGCACTGGCACAGGCACCAAGTCCGTATTCGGTGCCCAGATGGAATTCGA 21464 |||| | |||||||| || || ||||| ||| ||||| ||||||| ||||| Sbjct 12056 CAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGA 11997 Query 21465 TCTGCGTGAGGGCTTCCCCCTGCT--CCAG-AAGAAGA-CCACCCCCTTCACCACGATCT 21520 ||| || |||||||| ||| | ||| |||||| ||||| | | | ||| Sbjct 11996 CCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACC----TGAAATCCATCA 11941 Query 21521 TCACCGAGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCTACAGCAAAAG- 21579 || |||||| |||| | || ||||| || | | ||| ||| | || | | Sbjct 11940 TCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGC-GCGAGCGC 11882 Query 21580 GGC-TGCCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGG 21638 ||| || | |||||||||||||||||| | || |||| ||| || ||| | || || Sbjct 11881 GGCGTGAC-CATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGG 11823 Query 21639 TGCCCAGTGGCGCAGCATCCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGC 21698 | |||||||||||| | ||||| || | ||||||||||| | ||| | || Sbjct 11822 CGTGCAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGC 11763 Query 21699 AC--AAGAGCTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAAC 21756 |||| | | | | | |||||| |||||||||||||| | ||||||||| Sbjct 11762 GGTGAAGACCATCAA--GGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAAC 11705 Query 21757 GTGGCCGAGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 ||||| || || ||||||| ||| | || ||||| ||| | |||||||||| Sbjct 11704 GTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCT 11650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236635343741564