Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2047 98.7 8e-16 >seq2047 Length=330620 Score = 98.7 bits (108), Expect = 8e-16 Identities = 232/346 (67%), Gaps = 12/346 (3%) Strand=Plus/Plus Query 19430 CCAAAA-TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 |||||| |||| ||||| || ||| | |||| |||||||| || || || ||||||||| Sbjct 53164 CCAAAAGTTGTCAATGGCCCGGAAGTTCTAAACAAATATGTTGGCCAGTCCGAAGAAAAT 53223 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547 | || | ||||| || || || |||| | | || | |||| | | ||| Sbjct 53224 ATTAGAAAGCTTTTTGCCGATGCAGA-GAAGGAATACAAGGAGAAGGGAGAGGAGAGTGG 53282 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601 |||| || || || | || ||| ||||||| | || ||||| ||||| | Sbjct 53283 ACTGCATATCATCATCTTTGACGAACTGGACGCTGTTTGCAAGCAGCGAGGTAGCGGGGC 53342 Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658 ||| || | ||| || ||||| || ||||| || || | || || | || || Sbjct 53343 TGGCGGTGGCACTGGTGTTGGTGACAGCGTCGTCAACCAGCTTTTATCCAAGCTTGATGG 53402 Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718 |||| | ||| |||| || || || | |||||||||||||| ||| ||| | || || Sbjct 53403 TGTTGATCAATTGAACAACATCCTATTGATTGGCATGACTAACAGAAAGGATATGATTGA 53462 Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATT 19764 | ||| | |||||||| || || ||||| || | || |||||| Sbjct 53463 CGATGCCCTTTTACGACCTGGCCGTTTGGAGGTACACATGGAAATT 53508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442804957620