Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2047 98.7 8e-16
>seq2047
Length=330620
Score = 98.7 bits (108), Expect = 8e-16
Identities = 232/346 (67%), Gaps = 12/346 (3%)
Strand=Plus/Plus
Query 19430 CCAAAA-TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||| |||| ||||| || ||| | |||| |||||||| || || || |||||||||
Sbjct 53164 CCAAAAGTTGTCAATGGCCCGGAAGTTCTAAACAAATATGTTGGCCAGTCCGAAGAAAAT 53223
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTC 19547
| || | ||||| || || || |||| | | || | |||| | | |||
Sbjct 53224 ATTAGAAAGCTTTTTGCCGATGCAGA-GAAGGAATACAAGGAGAAGGGAGAGGAGAGTGG 53282
Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------C 19601
|||| || || || | || ||| ||||||| | || ||||| ||||| |
Sbjct 53283 ACTGCATATCATCATCTTTGACGAACTGGACGCTGTTTGCAAGCAGCGAGGTAGCGGGGC 53342
Query 19602 TGG---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGG 19658
||| || | ||| || ||||| || ||||| || || | || || | || ||
Sbjct 53343 TGGCGGTGGCACTGGTGTTGGTGACAGCGTCGTCAACCAGCTTTTATCCAAGCTTGATGG 53402
Query 19659 TGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGA 19718
|||| | ||| |||| || || || | |||||||||||||| ||| ||| | || ||
Sbjct 53403 TGTTGATCAATTGAACAACATCCTATTGATTGGCATGACTAACAGAAAGGATATGATTGA 53462
Query 19719 CAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATT 19764
| ||| | |||||||| || || ||||| || | || ||||||
Sbjct 53463 CGATGCCCTTTTACGACCTGGCCGTTTGGAGGTACACATGGAAATT 53508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397442804957620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |