Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2528 95.1 1e-14 seq934 89.7 4e-13 >seq2528 Length=594046 Score = 95.1 bits (104), Expect = 1e-14 Identities = 320/491 (65%), Gaps = 17/491 (3%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCA 131672 ||||||| | | | ||| ||||||||| ||||| ||||||||||||||||| || Sbjct 61409 TGGGACAGAACAAGGTCCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGG 61350 Query 131673 CCCATAACGCGTACAACAGATCTCTAGCTTT---TTTCTCTTCTGTACCCATAAtttttt 131729 ||| | || || ||||| | |||| | || ||||| | || | ||||| Sbjct 61349 TCCAGAGAGCAAGAAAGAGATCACGAGCTCTCACTTCCTCTTTT----CCGTGGTTTTTA 61294 Query 131730 tCAA-ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 | || ||||| || || || || | ||||||||||| | ||| | || | || Sbjct 61293 CGGAGATCCAAAAATTCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCA 61234 Query 131789 CCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 ||| || ||| || || || | ||||| ||| | |||||||| | || || | | Sbjct 61233 CCTGGTCGTTTATTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGC 61174 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 ||||| | ||||| | | ||||| || | ||||||| |||| |||| | | Sbjct 61173 ATGGGGATGATTCCGTTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGG 61114 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGT 131964 || ||| || || || |||||||| || || || || || || ||||| || | | Sbjct 61113 ATACGGTGTACATTAAGACCAATACCACCAGCTGTCTTG-GAAATCAGTGCACAGGTTTT 61055 Query 131965 TAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024 || || | ||||||||||| | || ||| | ||||||| | || || || | Sbjct 61054 GAGCGTATCGTAGATACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGC 60995 Query 132025 CAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGT 132082 || ||| | || || || || |||||| | ||||| ||||| || || | | Sbjct 60994 CATTTGTGGCTGTGGAGTTCCCGCGTTGAAAAGA--GTGGGAGAAGCGTGAGTGAAGAAT 60937 Query 132083 TTTTTGGCCAT 132093 |||| || ||| Sbjct 60936 TTTTGGGACAT 60926 >seq934 Length=187681 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||| |||||||| | |||| | ||||| Sbjct 9498 ACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 9439 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | || | || || || || || || | ||||| || || | Sbjct 9438 AGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 9379 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| | || | | || | || || ||| ||||| || ||||| || | |||| Sbjct 9378 ATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTTTTG 9319 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| || || ||||| Sbjct 9318 CCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424920292709088