Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2528 170 2e-37 seq2704 107 2e-18 >seq2528 Length=594046 Score = 170 bits (188), Expect = 2e-37 Identities = 716/1114 (64%), Gaps = 36/1114 (3%) Strand=Plus/Minus Query 110324 TCAAGACTGAACTGAATTGGT-CGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGT 110382 |||| | |||| |||||||| | | | | ||| | | |||||| |||||||||||||| Sbjct 62662 TCAACAGTGAATTGAATTGGAGCAGACGCT-GCCATGGTTCGGAGGTAGTACATCCCGGT 62604 Query 110383 CTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACT 110442 || || || | |||||| || | ||||| | || ||| ||| || || Sbjct 62603 TTTCAGGCCCAGCTTCCATCCGGCAAAGTGCATGCTGGTGATTTTGCCCATGGTGGGC-- 62546 Query 110443 TTCCATGAAGAGG---TTCATACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGC 110499 ||| | ||| || |||| | ||| ||||| ||||| || || | || || Sbjct 62545 -TCCTTCAAGTGGATATTCAGAGATTGGGACTGGTCGATGAATGCACCACGATCGGCAGC 62487 Query 110500 CATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGAT 110556 ||| | || | | ||| ||| | |||||||| || || |||||| || || Sbjct 62486 CATCTGAACAA--TGGTTC-TCTGAGAGATTTCCCACACCGTCTTATAGAGTGCTTTAAT 62430 Query 110557 ATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGAGA---T 110612 ||| | ||||||| | ||| |||||||| ||||| ||||||| || ||| | | Sbjct 62429 ATCCGCAGGGATATTGGGGATGTTCTGGATCGAACC----GCCTTCAGCAATGATACGGT 62374 Query 110613 CCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGA 110672 |||||||| | ||||| ||||| | | ||| || || | || ||| | Sbjct 62373 TCTTCATATTGTCCGACCACAGACCGAGATCGACGAGATCTTTCAGAAGCCATGGGTTAA 62314 Query 110673 CAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAA 110732 | | ||||| ||||| || | || |||||||||| ||||||||| |||| Sbjct 62313 CGACTTGGAACTCGCCTGCAAGAACCCGTCGAGAATAGATGTTTGATGTGTATGGCTCAA 62254 Query 110733 AGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAA 110792 | ||||| || || | ||| || |||| || |||||||| ||||| | | | Sbjct 62253 AACATTCGTTGAATCCGAGGATCTGACTGGTGCTAGCAGTTGGCATAGGTGCAACGAGCA 62194 Query 110793 GACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTT 110850 ||||||| || | ||| | | |||| | || || | ||||| || | | | Sbjct 62193 GACTGTTGCGTACACCATGTTTGGCGATGTCCTTTTTCAGCGCGTCCCAATCCCAAAGGT 62134 Query 110851 GAGCTTGGTTTCACCTTCCCACATGTCAAACTG--AAGCACCCCTTGGGACGCGGGAGAA 110908 || |||| |||| |||| |||| ||| |||| ||| |||| || || | ||||| Sbjct 62133 CAG-TTGGCGTCACGTTCC-ACATATCATACTGCAAAGTACCC--TGAGATACAGGAGAG 62078 Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968 || || |||| ||||||| || | ||| || | || || ||| || | Sbjct 62077 CCTTCGTAGGTCTCATAGGGCCCGTCAACTTTGGCGATATCGCAAGACGCGGTCAAAGCC 62018 Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028 || ||||| || ||||||||||| || ||||| || ||| || || ||||||||| Sbjct 62017 GCATGATAAATTGTTTCAAAGATCTGAATATTCAACTGCTTAGCCTCGGGCGAATCAAAT 61958 Query 111029 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 111088 | | ||| | || || |||| || |||||||| || || | | ||||| | Sbjct 61957 GGCAATCGGAGCGCAAGGAAAGCATCGGCAAGACCTTGGACGCCAACCGCGATAGGCCGA 61898 Query 111089 TGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACT 111145 || || | |||| ||| || || ||| || ||||| || | ||||| | | Sbjct 61897 TGACGGAAATTACTCTTGCGGGCT---TCAGGGACAGGATAGTGGTTGTTATCAATAATT 61841 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTG 111205 ||| ||||| | || || | || | |||||| | ||| || | ||| | | Sbjct 61840 TTGTTCAGATTGCGGACAAGAACTTGAGTAACTTCATGCAATTTGCCAAAGTCATACTCG 61781 Query 111206 CGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 111265 | | | || || || | || | ||| | ||||||| |||||||| || Sbjct 61780 CCACGAACAGGATCAACGTATGTGGGCAAGGCAAGCGATGCCAGGTTGCAAACTGCAACT 61721 Query 111266 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCC 111325 ||||| | |||||||| | ||||| || || | ||| || || ||| || || Sbjct 61720 TCATCTGGGGCGGTGTACTCGATGATTTCCGTGCAGAGGTTCGAGCTTCGAATAGTTCCA 61661 Query 111326 AAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 111385 | || || ||||| ||||| |||||||||||||||||| |||||| | || | ||| Sbjct 61660 AGGTTTTTCTGGTTGCTCTTGCGGTTGCACGCATCCTTGTAAAGCATGAACGGGTTACCC 61601 Query 111386 GTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419 ||||||||||| | || || || || | ||||| Sbjct 61600 GTCTCCGTCTGAGCTTCTAGGATGGCATACCAAA 61567 >seq2704 Length=633058 Score = 107 bits (118), Expect = 2e-18 Identities = 296/449 (66%), Gaps = 6/449 (1%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| ||||||||||||||||| ||||| || || |||||| ||||| Sbjct 56156 TAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAGCGAAATGTTGTCCATG 56215 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||| ||||| ||| |||| || | | | | ||| || || | | Sbjct 56216 AAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACC--AAGAGCGACAAGCAACC 56273 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 || | ||| |||| ||||| | | |||| | |||||||| |||| ||| | Sbjct 56274 TGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCATGCCGAGAAGGGCGC 56333 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || || || | ||| |||| || ||||| || || ||| | | | || | Sbjct 56334 AAGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTTCTGTGATAACAGCCT 56393 Query 122609 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCC 122667 || | | || | || | | ||| || || |||||| |||||| || Sbjct 56394 CGACGGCCTGGGGGCTCGGGCGGTGACG-AAGGTGAGAGAAGAGAAGACAGGCAAAGTCA 56452 Query 122668 TGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGA 122727 |||||| ||||| || |||||||| |||||||| |||||| || || ||||| || Sbjct 56453 GTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGG 56512 Query 122728 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 122787 || |||||||||| ||| | |||| | || || || ||| ||||||||||| || Sbjct 56513 CCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAAAAGATACCCTCAACG 56572 Query 122788 CACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||||| |||| |||||| | ||| || Sbjct 56573 GCTGCAAAGGCAACAAGGCGCTGGGCAAA 56601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628010615510400