Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2528 154 2e-32 seq2704 127 2e-24 seq2246 98.7 1e-15 >seq2528 Length=594046 Score = 154 bits (170), Expect = 2e-32 Identities = 360/538 (67%), Gaps = 5/538 (1%) Strand=Plus/Minus Query 79351 AGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCC 79410 |||| ||| || ||| |||||||||| || ||| || | || ||| |||| || || Sbjct 61397 AGGT-CCAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCA 61339 Query 79411 GTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAG 79470 ||||| || || | || ||||| | || ||||| ||| || || | ||| Sbjct 61338 AGAAAGAGATCACGAGCTCTCACTTCCTCTTTTCCGTGGTTTTTACGGAGATCCAAAAAT 61279 Query 79471 TCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCG 79530 || | ||| |||| |||||| || || |||||||||||||| | ||| || || | Sbjct 61278 TCGAAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTG 61219 Query 79531 CCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCG 79590 || ||||||| || || || || ||||||||||| || ||||||||||| | ||| ||| Sbjct 61218 CCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCG 61159 Query 79591 TCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAAT--GTTCGAGCAGT 79648 | | | ||| || || || || | || | || || || | | | || | Sbjct 61158 TTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGT-GTACA-T 61101 Query 79649 GGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGA 79708 | || || || || | |||||| || | || || |||||||| ||||||| Sbjct 61100 TAAGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGA 61041 Query 79709 TGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGT 79768 | || ||||| || |||||||| ||| ||||| ||| | ||| ||||| | Sbjct 61040 TACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTG 60981 Query 79769 TCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGAT 79828 || || |||||||| || || || | ||||| |||||||| |||||| ||||| || Sbjct 60980 GAGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAAT 60921 Query 79829 CGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 ||| || || | | | | ||| |||||||| || || ||||| || ||||| Sbjct 60920 TGTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCAT 60863 Score = 118 bits (130), Expect = 1e-21 Identities = 353/539 (65%), Gaps = 7/539 (1%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC--GAGACATACG 19175 ||||| || ||||| || || || ||||| ||| | | || || || || ||| Sbjct 60863 ATGCGGGTTGCGGTTGGTATTCACGGCGAGGACATT--GAGAAGGCGATTGAAACTTACA 60920 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 | ||||| ||| || |||||||| ||||| | || || ||||||||||| || || Sbjct 60921 ATTTGATGTCCCAAAAATTCTTCACTCACGCTTCTCCCACTCTTTTCAACGCGGGAACTC 60980 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | || || ||| | ||||||||| | | |||||||| || || || || || | Sbjct 60981 CACAGCCACAAATGGCATCCTGTTTCCTCATCGACATGAAGGAGGATAGTATCGAAGGTA 61040 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| |||||||| || || | || |||||| | || ||||| || | Sbjct 61041 TCTACGATACGCTCAAAACCTGTGCACTGATTTCCAAGACAGCTGGTGGTATTGGTCTTA 61100 Query 19356 AC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGAC 19414 | | | | |||||| | | ||| | || || || || || | || Sbjct 61101 ATGTACACCG-TATCCGTGCCACTGGCTCCTACATTGCAGGAACAAATGGCTCCTCTAAC 61159 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || ||| |||| |||||||| |||||||||||||| || | || || ||||||| ||| Sbjct 61160 GGAATCATCCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTATGTTGACCAGGGTGGC 61219 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||||| || | ||||||||||| || || || |||||| | || || | || Sbjct 61220 AATAAACGACCAGGTGCCTTCGCCATCTATCTTGAACCCTGGCACTCCGATATCTTCGAA 61279 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 || | || || || ||||| || | ||||| || | ||| || ||||| Sbjct 61280 TTTTTGGATCTCCGTAAAAACCACGGAAAAGAGGAAGTGAGAGCTCGTGATCTCTTTCTT 61339 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCT 19653 || | |||| || || | || ||| || |||||||||| ||| || ||| |||| Sbjct 61340 GCTCTCTGGACCCCAGATTTGTTTATGAAGCGGGTTGAGAAGAACGGCGATTGG-ACCT 61397 >seq2704 Length=633058 Score = 127 bits (140), Expect = 2e-24 Identities = 144/191 (75%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATG--AGTCCTGGAG-CATCATTTGCACAACGTCTC 59987 || || || |||||||| | ||||| || || ||| || | ||||| || || || Sbjct 56646 AAGGCTGATTGGGCCATTCGATGGATCCAAGACCAGGAATCAACTTTTGCCCAGCGCCTT 56587 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 | || |||||| ||| || || ||||| ||| |||||| || |||| |||||| Sbjct 56586 GTTGCCTTTGCAGCCGTTGAGGGTATCTTTTTCAGTGGCTCTTTTGCCTCTATCTTCTGG 56527 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGAC 60107 || || ||||||||||| ||||| ||||| | |||||||| || ||||||||||| ||| Sbjct 56526 CTGAAGAAGCGTGGCCTTATGCCTGGCCTCACCTTCTCCAATGAACTGATTTCCCGCGAC 56467 Query 60108 GAGGGCCTCCA 60118 ||||||||||| Sbjct 56466 GAGGGCCTCCA 56456 >seq2246 Length=7892 Score = 98.7 bits (108), Expect = 1e-15 Identities = 277/420 (66%), Gaps = 14/420 (3%) Strand=Plus/Minus Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| |||||||||||||| ||||||| | |||| | || ||||| Sbjct 3702 CATGAACAGGTCCGGGATCCAGTTGGCCGTGTTCATGTCGTGCGTGCGGCGGCGGTCGTC 3643 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 ||| ||||| |||||||| || || ||| ||||| |||||| |||||| || Sbjct 3642 GCCGGGGTTCTTGCGCAGCTCCAGGAACTCCTCCATGTCCAGGTGCCAGCTCTCCAGGTA 3583 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 | || || || ||||||||||||| |||||||||| || | ||| |||| ||| Sbjct 3582 GGTGCAGACCGCGCCCTTGCGCTTGC---CGCCCTGGTTCACCGCCACGGCGGTGTCGTT 3526 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA--CGCCGTTCGTCCCGTTGATTCGT 79620 | || || | ||||| | ||| | |||| ||||||| || || ||||| | Sbjct 3525 CACCACCTTCAGGAACGGCACCACGCC--CTGCGATTCGCCGTTGGTGCCCTTGATGTGC 3468 Query 79621 GTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 | || ||| || | | | |||| | | || | || || | ||||||| | Sbjct 3467 GAGCCCAGCGCGCGCACGCGGGTCCAGTCGTTGCCCAGCCCGCCCGCGAACTTGGACAGC 3408 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 ||||| ||||||| || |||||||||||| || | ||||||| || | | Sbjct 3407 AGCGCGTTTTCCTTGATCGACTCGTAGATGCCGTC---CAGGTCGTCCGGCACCGTGGTG 3351 Query 79741 AGGAAGCAGCTCGACATCTG--TGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCG 79798 ||| ||||| |||| ||| || | | ||| ||| |||||| || ||||| |||| Sbjct 3350 AGGTAGCAGGAGGACAGCTGGCTGCGCAG--CGTGCCGCTGTTGAACAGCGTCGGGGTCG 3293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548506122730560