Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2528 141 1e-28 seq2704 96.9 4e-15 seq1332 86.0 7e-12 >seq2528 Length=594046 Score = 141 bits (156), Expect = 1e-28 Identities = 365/547 (67%), Gaps = 12/547 (2%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 ||| || ||| | || ||| |||||| | ||| || ||||| | || || || ||||| Sbjct 60910 TGAAACTTACAATTTGATGTCCCAAAAATTCTTCACTCACGCTTCTCCCACTCTTTTCAA 60969 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 ||| || || || || || ||| | ||| ||||| | | |||||||| || Sbjct 60970 CGCGGGAACTCCACAGCCACAAATGGCATCCTGTTTCCTCATCGACATGAAGGAGGATAG 61029 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| || |||||||| |||||||| ||||| | || |||||| | ||||| Sbjct 61030 TATCGAAGGTATCTACGATACGCTCAAAACCTGTGCACTGATTTCCAAGACAGCTGGTGG 61089 Query 53422 TATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||| ||| | | || | | ||| |||||| | ||| | || || || || Sbjct 61090 TATTGGTCTTAA-TGTAC-ACCGTATCCGTGCCACTGGCTCCTACATTGCAGGAACAAAT 61147 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 ||| | | | |||||| | || |||||||| |||||||||||||| || || || || Sbjct 61148 GGCTCCTCTAACGGAATCATCCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTATGTT 61207 Query 53540 AACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 |||||||||| || || | ||| | | ||||||||||| || || || |||||| | Sbjct 61208 GACCAGGGTGGCAATAAACGACCAGGTG-CCTTCGCCATCTATCTTGAACCCTGGCACTC 61266 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGG---TGACGAAGAGATGCGCTG 53655 ||| || | || ||| | || || ||| || || || || |||| || | ||| Sbjct 61267 CGATATCTTCGAATTTTTGGATCTCCGTAAAAACCACGGAAAAGAGGAAGTGA-GAGCT- 61324 Query 53656 CCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGA 53715 ||||| || ||| ||||| |||| || || | || ||| | ||| |||||| | Sbjct 61325 -CGTGATCTCTTTCTTGCTCTCTGGACCCCAGATTTGTTTATGAAGCGGGTTGAGAAGAA 61383 Query 53716 CGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGA 53775 || || ||| | || | || || || ||| || || | | ||| ||||| || Sbjct 61384 CGGCGATTGGACCTTGTTCTGTCCCAATGAGGCACCAGGGTTGGCTGATGTTTACGGCGA 61443 Query 53776 GGAGTTT 53782 |||||| Sbjct 61444 CGAGTTT 61450 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803 |||||||||||| || | |||| | | || | ||| ||| ||||||||||| | Sbjct 62447 GACGGTGTGGGAAATCTCTCAGAGAACCATTGTTCAGATGGCTGCCGATCGTGGTGCATT 62506 Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863 ||||||||||||||| |||||||| ||| | || || | || | ||| ||| | | Sbjct 62507 CATCGACCAGTCCCAATCTCTGAATATCCACTTGAAGGAGCCCACCATGGGCAAAATCAC 62566 Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 | ||||||||| ||| |||||| ||| || || || || |||||||| || || || Sbjct 62567 CAGCATGCACTTTGCCGGATGGAAGCTGGGCCTGAAAACCGGGATGTACTACCTCCGAAC 62626 Query 55924 C 55924 | Sbjct 62627 C 62627 >seq2704 Length=633058 Score = 96.9 bits (106), Expect = 4e-15 Identities = 99/128 (77%), Gaps = 6/128 (5%) Strand=Plus/Plus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT- 74842 |||| |||||| || || | |||||||||||||| ||||||||||||| ||| ||||| Sbjct 56477 ATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATA 56536 Query 74843 --GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGT 74900 |||| || || |||||||| ||||| || || || |||||||| |||||||| Sbjct 56537 GAGGCA---AAAGAGCCACTGAAAAAGATACCCTCAACGGCTGCAAAGGCAACAAGGCGC 56593 Query 74901 TGCGCGAA 74908 || || || Sbjct 56594 TGGGCAAA 56601 >seq1332 Length=137326 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 124712 CTCGTGGTTGAACAGAATGCCAGTACAC-GCAAACATCCCGTACGACTCGCGGTAGTTTT 124770 ||||||||||||||| ||||| | ||| | || || || || || |||||||| Sbjct 20089 CTCGTGGTTGAACAGGATGCC-GCTCACTCCGAAGATGCCATAGCTTTCACGGTAGTTCA 20031 Query 124771 TCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGG 124830 |||||||| | || ||||||||| |||||| ||||| || || |||||||| || | Sbjct 20030 CAGTCATCCAGTGGGCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCG 19971 Query 124831 TGTTTTC-ATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889 || |||| | || || | | ||| | | || |||||||| || || | ||||||| Sbjct 19970 TGCTTTCGACTTGCGGCACG-GCCTGCACCAGACCGAACATCTCGGACGTGCTCGCCTGA 19912 Query 124890 TAGAA 124894 || || Sbjct 19911 TAAAA 19907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547197367295200