Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 141 1e-28
seq2704 96.9 4e-15
seq1332 86.0 7e-12
>seq2528
Length=594046
Score = 141 bits (156), Expect = 1e-28
Identities = 365/547 (67%), Gaps = 12/547 (2%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
||| || ||| | || ||| |||||| | ||| || ||||| | || || || |||||
Sbjct 60910 TGAAACTTACAATTTGATGTCCCAAAAATTCTTCACTCACGCTTCTCCCACTCTTTTCAA 60969
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
||| || || || || || ||| | ||| ||||| | | |||||||| ||
Sbjct 60970 CGCGGGAACTCCACAGCCACAAATGGCATCCTGTTTCCTCATCGACATGAAGGAGGATAG 61029
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
||||| || |||||||| |||||||| ||||| | || |||||| | |||||
Sbjct 61030 TATCGAAGGTATCTACGATACGCTCAAAACCTGTGCACTGATTTCCAAGACAGCTGGTGG 61089
Query 53422 TATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
||| ||| | | || | | ||| |||||| | ||| | || || || ||
Sbjct 61090 TATTGGTCTTAA-TGTAC-ACCGTATCCGTGCCACTGGCTCCTACATTGCAGGAACAAAT 61147
Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539
||| | | | |||||| | || |||||||| |||||||||||||| || || || ||
Sbjct 61148 GGCTCCTCTAACGGAATCATCCCCATGCTCCGTGTCTTCAACAACACTGCTCGCTATGTT 61207
Query 53540 AACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598
|||||||||| || || | ||| | | ||||||||||| || || || |||||| |
Sbjct 61208 GACCAGGGTGGCAATAAACGACCAGGTG-CCTTCGCCATCTATCTTGAACCCTGGCACTC 61266
Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGG---TGACGAAGAGATGCGCTG 53655
||| || | || ||| | || || ||| || || || || |||| || | |||
Sbjct 61267 CGATATCTTCGAATTTTTGGATCTCCGTAAAAACCACGGAAAAGAGGAAGTGA-GAGCT- 61324
Query 53656 CCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGA 53715
||||| || ||| ||||| |||| || || | || ||| | ||| |||||| |
Sbjct 61325 -CGTGATCTCTTTCTTGCTCTCTGGACCCCAGATTTGTTTATGAAGCGGGTTGAGAAGAA 61383
Query 53716 CGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGA 53775
|| || ||| | || | || || || ||| || || | | ||| ||||| ||
Sbjct 61384 CGGCGATTGGACCTTGTTCTGTCCCAATGAGGCACCAGGGTTGGCTGATGTTTACGGCGA 61443
Query 53776 GGAGTTT 53782
||||||
Sbjct 61444 CGAGTTT 61450
Score = 96.9 bits (106), Expect = 4e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 55744 GACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTA 55803
|||||||||||| || | |||| | | || | ||| ||| ||||||||||| |
Sbjct 62447 GACGGTGTGGGAAATCTCTCAGAGAACCATTGTTCAGATGGCTGCCGATCGTGGTGCATT 62506
Query 55804 CATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAG 55863
||||||||||||||| |||||||| ||| | || || | || | ||| ||| | |
Sbjct 62507 CATCGACCAGTCCCAATCTCTGAATATCCACTTGAAGGAGCCCACCATGGGCAAAATCAC 62566
Query 55864 CTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
| ||||||||| ||| |||||| ||| || || || || |||||||| || || ||
Sbjct 62567 CAGCATGCACTTTGCCGGATGGAAGCTGGGCCTGAAAACCGGGATGTACTACCTCCGAAC 62626
Query 55924 C 55924
|
Sbjct 62627 C 62627
>seq2704
Length=633058
Score = 96.9 bits (106), Expect = 4e-15
Identities = 99/128 (77%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT- 74842
|||| |||||| || || | |||||||||||||| ||||||||||||| ||| |||||
Sbjct 56477 ATCAGTTCATTGGAGAAGGTGAGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATA 56536
Query 74843 --GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGT 74900
|||| || || |||||||| ||||| || || || |||||||| ||||||||
Sbjct 56537 GAGGCA---AAAGAGCCACTGAAAAAGATACCCTCAACGGCTGCAAAGGCAACAAGGCGC 56593
Query 74901 TGCGCGAA 74908
|| || ||
Sbjct 56594 TGGGCAAA 56601
>seq1332
Length=137326
Score = 86.0 bits (94), Expect = 7e-12
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 124712 CTCGTGGTTGAACAGAATGCCAGTACAC-GCAAACATCCCGTACGACTCGCGGTAGTTTT 124770
||||||||||||||| ||||| | ||| | || || || || || ||||||||
Sbjct 20089 CTCGTGGTTGAACAGGATGCC-GCTCACTCCGAAGATGCCATAGCTTTCACGGTAGTTCA 20031
Query 124771 TCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGG 124830
|||||||| | || ||||||||| |||||| ||||| || || |||||||| || |
Sbjct 20030 CAGTCATCCAGTGGGCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCG 19971
Query 124831 TGTTTTC-ATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889
|| |||| | || || | | ||| | | || |||||||| || || | |||||||
Sbjct 19970 TGCTTTCGACTTGCGGCACG-GCCTGCACCAGACCGAACATCTCGGACGTGCTCGCCTGA 19912
Query 124890 TAGAA 124894
|| ||
Sbjct 19911 TAAAA 19907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547197367295200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |