Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq934 158 1e-33 seq1640 134 2e-26 seq1954 107 2e-18 seq653 98.7 1e-15 seq2528 96.9 4e-15 >seq934 Length=187681 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | ||||| ||||| || || ||||| ||||| || Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | ||||| || ||||||||||||||||| ||||||||| Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 9933 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||||||||| || || ||||| || || |||| ||| || || ||||||| || Sbjct 9934 CAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAC 9993 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || || ||||| ||| | || || |||||||| Sbjct 9994 ATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGG 10040 Score = 150 bits (166), Expect = 2e-31 Identities = 169/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466 || |||| |||||||||| |||||||| ||||| || |||||||| || ||||| | Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646 Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526 ||| ||| | || |||| | || || || |||||||| || || ||||| || |||| Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGC 9706 Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586 ||||| | || || || || ||||| |||||||| | || || || | || ||||| Sbjct 9707 AGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACA 9766 Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||| || || || ||| | ||||| |||||||| Sbjct 9767 TTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGG 9812 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| | ||||||||||||||||| | ||||| || || Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||| | ||||| || || |||||||| || || |||||||| Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| |||||||||||||||||||| || |||| || || || | |||||||| Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221 Query 27586 GTCCAAAAGGAA 27597 |||| |||||| Sbjct 10222 ATCCAGAAGGAA 10233 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || ||||| || || ||||| ||||||||||| || Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGT 9349 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||| | || || |||||||||||||| || ||||| |||||| Sbjct 9350 GATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 9409 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || |||||||| || || || |||| || || || | ||||| || Sbjct 9410 CAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 9469 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 | || ||||| || || ||||| Sbjct 9470 ATTCAGAAGGAGTCAACCCTTCA 9492 >seq1640 Length=153026 Score = 134 bits (148), Expect = 2e-26 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || |||||||||||||| || || ||||| ||||| | || | || Sbjct 9863 CTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAAT 9804 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| || |||||||||||||| || || ||||| |||||||||||| | Sbjct 9803 CGACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTTT 9744 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 |||||||| || ||||| |||||||| | || ||| | ||| || |||||| | || | Sbjct 9743 GATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGC-GATTATAATATTCAGA 9685 Query 27593 AGG 27595 ||| Sbjct 9684 AGG 9682 >seq1954 Length=527115 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||| ||||| || || ||||| || || |||||| Sbjct 282596 GACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAGCTCGAG 282655 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | || || || |||| ||||| ||||| ||||| || ||| | Sbjct 282656 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTCCTC 282715 Query 27619 CGTCTTCGCGGTGG 27632 ||||| |||||||| Sbjct 282716 CGTCTCCGCGGTGG 282729 >seq653 Length=29589 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 24758 GGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGT 24817 ||||||||| || || ||| |||| ||| ||||||||||| ||| || |||| ||| Sbjct 16961 GGTGCAGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGT 17020 Query 24818 CTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGC 24877 ||||| | | ||| || ||||| || ||||||||| || ||| |||| ||||| || Sbjct 17021 AGCAAAGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGC 17080 Query 24878 ATGCAACGGAATTCTGTTCAACCATGA 24904 ||||| || || ||||| || || || Sbjct 17081 TTGCAATGGCATCCTGTTTAATCACGA 17107 >seq2528 Length=594046 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 || || ||||| ||||| || || || || || | | || |||||| |||||||||| Sbjct 61747 AGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTACTCGATGATTTCCGTG 61688 Query 80965 CACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022 || | || || ||| ||| || || |||||||||||||| |||| |||||| | Sbjct 61687 CAGAGGTTCGAG--CTTCGAATAGTTCCAAGGTTTTTCTGGTTGCTCTTGCGGTTGCACG 61630 Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082 | |||||||| |||| ||||| |||| ||||| ||| | | |||||||| | || Sbjct 61629 CATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTCTAGGATGGCATACC 61570 Query 81083 AAATCT 81088 ||| || Sbjct 61569 AAAGCT 61564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570290980930880