Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq934 158 1e-33
seq1640 134 2e-26
seq1954 107 2e-18
seq653 98.7 1e-15
seq2528 96.9 4e-15
>seq934
Length=187681
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| | ||||| ||||| || || ||||| ||||| ||
Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | || | ||||| || ||||||||||||||||| |||||||||
Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 9933
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||||||||| || || ||||| || || |||| ||| || || ||||||| ||
Sbjct 9934 CAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAC 9993
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || || ||||| ||| | || || ||||||||
Sbjct 9994 ATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGG 10040
Score = 150 bits (166), Expect = 2e-31
Identities = 169/226 (75%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
|| |||| |||||||||| |||||||| ||||| || |||||||| || ||||| |
Sbjct 9587 TGAAAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGG 9646
Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526
||| ||| | || |||| | || || || |||||||| || || ||||| || ||||
Sbjct 9647 ATACCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGC 9706
Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586
||||| | || || || || ||||| |||||||| | || || || | || |||||
Sbjct 9707 AGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACA 9766
Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||||||||| || || || ||| | ||||| ||||||||
Sbjct 9767 TTCAGAAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGG 9812
Score = 143 bits (158), Expect = 3e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| | ||||||||||||||||| | ||||| || ||
Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || ||||| | ||||| || || |||||||| || || ||||||||
Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| |||||||||||||||||||| || |||| || || || | ||||||||
Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221
Query 27586 GTCCAAAAGGAA 27597
|||| ||||||
Sbjct 10222 ATCCAGAAGGAA 10233
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || ||||| || || ||||| ||||||||||| ||
Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGT 9349
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| | ||| | || || |||||||||||||| || ||||| ||||||
Sbjct 9350 GATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 9409
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || || |||||||| || || || |||| || || || | ||||| ||
Sbjct 9410 CAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 9469
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
| || ||||| || || |||||
Sbjct 9470 ATTCAGAAGGAGTCAACCCTTCA 9492
>seq1640
Length=153026
Score = 134 bits (148), Expect = 2e-26
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || |||||||||||||| || || ||||| ||||| | || | ||
Sbjct 9863 CTTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGCGACACAAT 9804
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| || |||||||||||||| || || ||||| |||||||||||| |
Sbjct 9803 CGACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGTTT 9744
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592
|||||||| || ||||| |||||||| | || ||| | ||| || |||||| | || |
Sbjct 9743 GATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCACCTTGAGC-GATTATAATATTCAGA 9685
Query 27593 AGG 27595
|||
Sbjct 9684 AGG 9682
>seq1954
Length=527115
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || |||||||| ||||| || || ||||| || || ||||||
Sbjct 282596 GACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAGCTCGAG 282655
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || ||||| | || || || |||| ||||| ||||| ||||| || ||| |
Sbjct 282656 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTCCTC 282715
Query 27619 CGTCTTCGCGGTGG 27632
||||| ||||||||
Sbjct 282716 CGTCTCCGCGGTGG 282729
>seq653
Length=29589
Score = 98.7 bits (108), Expect = 1e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 24758 GGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGT 24817
||||||||| || || ||| |||| ||| ||||||||||| ||| || |||| |||
Sbjct 16961 GGTGCAGGAAACACCGCAGCGCGAGAACACACCATTTTATCCCCGATCACCATATGCGGT 17020
Query 24818 CTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGC 24877
||||| | | ||| || ||||| || ||||||||| || ||| |||| ||||| ||
Sbjct 17021 AGCAAAGCTATACGCATATTGGATGACGGTGAACTACCGAGAAGCCTATGGCATATACGC 17080
Query 24878 ATGCAACGGAATTCTGTTCAACCATGA 24904
||||| || || ||||| || || ||
Sbjct 17081 TTGCAATGGCATCCTGTTTAATCACGA 17107
>seq2528
Length=594046
Score = 96.9 bits (106), Expect = 4e-15
Identities = 134/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964
|| || ||||| ||||| || || || || || | | || |||||| ||||||||||
Sbjct 61747 AGCGATGCCAGGTTGCAAACTGCAACTTCATCTGGGGCGGTGTACTCGATGATTTCCGTG 61688
Query 80965 CACAAATTAGAAGACTT--AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAG 81022
|| | || || ||| ||| || || |||||||||||||| |||| |||||| |
Sbjct 61687 CAGAGGTTCGAG--CTTCGAATAGTTCCAAGGTTTTTCTGGTTGCTCTTGCGGTTGCACG 61630
Query 81023 CGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCC 81082
| |||||||| |||| ||||| |||| ||||| ||| | | |||||||| | ||
Sbjct 61629 CATCCTTGTAAAGCATGAACGGGTTACCCGTCTCCGTCTGAGCTTCTAGGATGGCATACC 61570
Query 81083 AAATCT 81088
||| ||
Sbjct 61569 AAAGCT 61564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570290980930880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |