Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq934 134 9e-27 >seq934 Length=187681 Score = 134 bits (148), Expect = 9e-27 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||||||||| || ||||| ||||| || | |||||||| || || ||||| || Sbjct 10005 CTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAA 9946 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 |||| ||| || ||||| || || | ||||||||||||| ||| ||||||||||||| Sbjct 9945 AATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-TTTTGTTTTAACGT 9887 Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 || || |||||| || ||||| | || || || || ||||| || || || | Sbjct 9886 TATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGA 9827 Query 34694 CAAAAATCTGCAT 34706 | ||||||||||| Sbjct 9826 CGAAAATCTGCAT 9814 Score = 122 bits (134), Expect = 5e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 ||| ||||| || | || || ||||| || |||||||| || ||||| || || | || Sbjct 10254 CAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATC 10195 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||||||||| ||||| ||||| || | ||| |||||||| || || | |||||||| || Sbjct 10194 TTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATC 10135 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672 | ||| |||||| || ||| | ||||||||| | || || || | || || | Sbjct 10134 TTGGAT-TTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAG 10076 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || ||||| || || |||||||| || ||||| Sbjct 10075 TCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||| |||||||||||||| || || || || |||| || || || Sbjct 9788 TGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTGC 9729 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || |||||||| || ||||| || | || ||||||||| |||| || Sbjct 9728 TTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATC-TT 9670 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 ||||| ||| || || || || ||||||||| | || || || || ||||| Sbjct 9669 GGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGT 9610 Query 34683 TAACGTTTTCACAA 34696 | || || |||| Sbjct 9609 AAGAGTCTTGACAA 9596 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | ||||| || || || |||||| |||||||| || || || Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||| |||||||| || || || || || || ||||| || || Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || || ||||| | || || || | ||| || Sbjct 9396 ATGCCCTCCTTGTCCTGGATC-TTGGTCTTAACATTGTCGATCGTATCACTGGACTCAAC 9338 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || ||||| || || | || ||||| ||||||||||| Sbjct 9337 CTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314719151370692