Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq934 134 9e-27
>seq934
Length=187681
Score = 134 bits (148), Expect = 9e-27
Identities = 147/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
||||||||||||||| || ||||| ||||| || | |||||||| || || ||||| ||
Sbjct 10005 CTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCGAA 9946
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|||| ||| || ||||| || || | ||||||||||||| ||| |||||||||||||
Sbjct 9945 AATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGGAT-TTTTGTTTTAACGT 9887
Query 34635 TA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
|| || |||||| || ||||| | || || || || ||||| || || || |
Sbjct 9886 TATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTCTTTCCGGTCAAGGTCTTGA 9827
Query 34694 CAAAAATCTGCAT 34706
| |||||||||||
Sbjct 9826 CGAAAATCTGCAT 9814
Score = 122 bits (134), Expect = 5e-23
Identities = 157/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553
||| ||||| || | || || ||||| || |||||||| || ||||| || || | ||
Sbjct 10254 CAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATC 10195
Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613
||||||||| ||||| ||||| || | ||| |||||||| || || | |||||||| ||
Sbjct 10194 TTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATC 10135
Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCG 34672
| ||| |||||| || ||| | ||||||||| | || || || | || || |
Sbjct 10134 TTGGAT-TTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAG 10076
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| || || |||||||| || |||||
Sbjct 10075 TCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| ||||| |||||||||||||| || || || || |||| || || ||
Sbjct 9788 TGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCCTCGAGCTGC 9729
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || |||||||| || ||||| || | || ||||||||| |||| ||
Sbjct 9728 TTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATC-TT 9670
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
||||| ||| || || || || ||||||||| | || || || || |||||
Sbjct 9669 GGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTCTTTCCGGT 9610
Query 34683 TAACGTTTTCACAA 34696
| || || ||||
Sbjct 9609 AAGAGTCTTGACAA 9596
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | ||||| || || || |||||| |||||||| || || ||
Sbjct 9516 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAG 9457
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | |||||||| |||||||| || || || || || || ||||| || ||
Sbjct 9456 AGAGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 9397
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || || ||||| | || || || | ||| ||
Sbjct 9396 ATGCCCTCCTTGTCCTGGATC-TTGGTCTTAACATTGTCGATCGTATCACTGGACTCAAC 9338
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || ||||| || || | || ||||| |||||||||||
Sbjct 9337 CTCGAGAGTGATGGTTTTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314719151370692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |