Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq934 145 7e-30
>seq934
Length=187681
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||| ||| | || || |||||||| ||| | ||
Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || ||| |||||| |||||||| || || || ||||| || ||
Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 9933
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| |||| | ||||||||| || | ||||| || || | || || ||||||
Sbjct 9934 CAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAC 9993
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| ||| ||||| | || | || |||| ||||| ||
Sbjct 9994 ATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGGTAT 10043
Score = 120 bits (132), Expect = 3e-22
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
||| |||| || ||||| ||||| ||| | || |||||||||||||| | || || |
Sbjct 9592 ATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGGATACC 9651
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
|| || | || ||| || || |||||||| |||||||| || || ||||| ||||||
Sbjct 9652 ATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGCGT 9711
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
|| || | |||||| || || | || ||| | ||| | || ||||| ||||||||
Sbjct 9712 TTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACATTCAG 9771
Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||| | || | || | ||| | || ||||| ||
Sbjct 9772 AAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGTAT 9815
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| |||||||| || || ||||||||||| ||||||| | || || ||| | ||
Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || |||||| ||||| || || || || ||||| || |||
Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||| | ||||| | || ||||||| || |||
Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|| || ||||| || || || ||||| ||| | || || |||||||
Sbjct 10222 ATCCAGAAGGAAAGTACGTTGCACTTGGTCTTGAGATTACGTGGTGGCA 10270
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/213 (69%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || ||||| | || ||||| || || || ||||
Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGA---GTCC 9346
Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104
|| |||| || | || || || || || ||||| || ||||| || || ||
Sbjct 9347 AGTGATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGAC 9406
Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164
|| || || || || | ||| || ||||| | ||||| | || | || || |||
Sbjct 9407 CAGCAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTAC 9466
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|||||||| |||||||| ||| | || ||||||
Sbjct 9467 AACATTCAGAAGGAGTCAACCCTTCACTTGGTT 9499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434903591028480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |