Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq934 145 7e-30 >seq934 Length=187681 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| | || || |||||||| ||| | || Sbjct 9814 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCA 9873 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || ||| |||||| |||||||| || || || ||||| || || Sbjct 9874 GACACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAG 9933 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| |||| | ||||||||| || | ||||| || || | || || |||||| Sbjct 9934 CAACGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAAC 9993 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| ||| ||||| | || | || |||| ||||| || Sbjct 9994 ATTCAAAAGGAGTCTACCCTACATCTCGTCCTTCGCCTGCGCGGTGGTAT 10043 Score = 120 bits (132), Expect = 3e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053 ||| |||| || ||||| ||||| ||| | || |||||||||||||| | || || | Sbjct 9592 ATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGGATACC 9651 Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 || || | || ||| || || |||||||| |||||||| || || ||||| |||||| Sbjct 9652 ATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGCGT 9711 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173 || || | |||||| || || | || ||| | ||| | || ||||| |||||||| Sbjct 9712 TTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACATTCAG 9771 Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||| | || | || | ||| | || ||||| || Sbjct 9772 AAGGAATCCACCCTCCACCTTGTCCTTCGTCTCCGCGGTGGTAT 9815 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || || ||||||||||| ||||||| | || || ||| | || Sbjct 10042 ATGCAAATATTTGTGAAGACATTGACCGGCAAGACTATTACGTTAGAGGTCGAATCCTCA 10101 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||| ||||| || || || || ||||| || ||| Sbjct 10102 GACACAATCGACAACGTGAAGACAAAAATCCAAGATAAGGAGGGTATCCCACCAGACCAA 10161 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || || ||| | ||||| | || ||||||| || ||| Sbjct 10162 CAACGTCTCATTTTTGCTGGTAAGCAACTTGAAGATGGCCGCACGCTTTCCGACTATAAC 10221 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || ||||| || || || ||||| ||| | || || ||||||| Sbjct 10222 ATCCAGAAGGAAAGTACGTTGCACTTGGTCTTGAGATTACGTGGTGGCA 10270 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || ||||| | || ||||| || || || |||| Sbjct 9290 ATGCAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGA---GTCC 9346 Query 27048 ---GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || |||| || | || || || || || ||||| || ||||| || || || Sbjct 9347 AGTGATACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGAC 9406 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || || || || || | ||| || ||||| | ||||| | || | || || ||| Sbjct 9407 CAGCAACGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTAC 9466 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||| |||||||| ||| | || |||||| Sbjct 9467 AACATTCAGAAGGAGTCAACCCTTCACTTGGTT 9499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434903591028480