Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028770.1
Length=59878
Score E
Sequences producing significant alignments: (Bits) Value
seq2563 84.2 8e-12
>seq2563
Length=7248
Score = 84.2 bits (92), Expect = 8e-12
Identities = 231/342 (68%), Gaps = 14/342 (4%)
Strand=Plus/Plus
Query 5914 CAGCGCCTCGTCATCACCCGGCCCGCCGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCC 5973
|||||| |||| |||||||||| || || || || | ||||| ||||| |||||||||
Sbjct 3326 CAGCGCATCGTGCTCACCCGGCCGGCAGTGGAAGCGGGCGAGAAACTCGGGTTCCTGCCC 3385
Query 5974 GGCACTGTGGACGAGAAGATGGCACCCTACCTCACCCCGATGCTGGACGCGGTGATCGAC 6033
||| || | ||||| | | || ||||| ||| | |||||| | ||||
Sbjct 3386 GGCGACCTGACCCAGAAGGTCGATCCTTACCTGCGGCCGCTCTATGACGCGCTCTACGAC 3445
Query 6034 CTGGTCGGC-CCGA-CG-ATGACGAAGCGCCTCCTCGAGTCGC---GCCAGCTGGAGGTC 6087
|| | ||| ||| || |||| ||| || | ||||| ||| ||| |||||| ||
Sbjct 3446 CTCATGGGCTTCGAGCGCGTGACCAAG-GCGT--TCGAG-CGCAATGCC--CTGGAGATC 3499
Query 6088 GCCCCGCTGGCCTACATGCGAGGCCGGACGTTCAACGACACGTACATCGTCGCTGACGAG 6147
|| || ||||| | |||||| || || ||| | ||| || | | | || || ||||||
Sbjct 3500 GCGCCTCTGGCATTCATGCGCGGGCGCACGCTGAACAACGCCTTCGTCATCCTCGACGAG 3559
Query 6148 ATGCAGAACGCCAC-CCCGCGCCAGACCGCGCTGCTGGTGACCCGCCTGGGCTTCGGGAC 6206
|||||| | || |||| | |||| | || | | |||||| | |||||||| |
Sbjct 3560 GCCCAGAACACGACGCCCGAG-CAGATGAAGATGTTCCTCACCCGCATCGGCTTCGGCAG 3618
Query 6207 GAAGGCCGTCCTGAACGGTGACCCGGCCCAGTGCGACCTGCC 6248
||| ||| ||| || ||| |||| |||||||||
Sbjct 3619 CAAGTGCGTGGTGACAGGCGACGTCAGCCAGATCGACCTGCC 3660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 191481805841920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |