Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq1406 214 8e-51 seq665 192 3e-44 seq183 188 3e-43 seq121 149 3e-31 >seq1406 Length=1376 Score = 214 bits (236), Expect = 8e-51 Identities = 356/511 (70%), Gaps = 5/511 (1%) Strand=Plus/Plus Query 63983 GCCCTGGCCGAGGTCGATAAACGC-TTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAA 64041 ||||| || || ||||| ||| |||||| || ||||| |||||||| || | || Sbjct 808 GCCCTCGCGCAGATCGATCG-CGCGTTCGGCAAGGGCTCGGCAATGAAGCTCGGCCAGAA 866 Query 64042 GC---CACAGACTGTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGG 64098 | | || || || ||| | | |||||| ||| || ||| ||| || || Sbjct 867 GGAGGCGATGAAGGTCGAGGTCGTCTCGACCGGCAGCCTCGGGCTCGACATCGCGCTCGG 926 Query 64099 CATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAA 64158 | |||| || || | |||||| | || || |||| |||||| ||||| || || || Sbjct 927 CGTCGGCGGCCTGCCCAAGGGCCGTATCGTCGAGATCTTCGGCCCCGAATCCTCGGGCAA 986 Query 64159 GTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTA 64218 | | || || ||||||||| | ||| | |||| ||||| || |||| ||| || | Sbjct 987 GACGACGCTCGCGCTCCACGCGATCGCCGAATCGCAAAAGGCTGGCGGCACCGCGGCGTT 1046 Query 64219 CATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGA 64278 | ||||||| |||||| | || || || | || |||||| ||| || || || |||| Sbjct 1047 CGTCGACGCCGAGCACGCGCTCGATCCCGCTTATGCCAAGAAGCTGGGCGTCAACATCGA 1106 Query 64279 CAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCT 64338 | | || | || ||||| || || ||||||||||| || |||||||| ||| || Sbjct 1107 CGAACTGATCGTCTCGCAGCCCGATACCGGCGAGCAGGCGCTTGAGATCGTCGACACGCT 1166 Query 64339 CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCG 64398 |||| || || | | | | | || || || || || || || || |||||||| Sbjct 1167 CGTCCGCTCGAACGCGATCGACGTGCTGGTGGTCGATTCGGTCGCCGCGCTCGTGCCGCG 1226 Query 64399 CGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTC 64458 |||||| |||| ||||| || || ||||| ||||||||||| || |||||||| ||| Sbjct 1227 CGCCGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTTCAGGCGCGCCTGATGAG 1286 Query 64459 GCAGGCCATGCGCAAGCTCACCGGCACCATC 64489 ||||| |||||||||| |||||||| ||| Sbjct 1287 CCAGGCGCTGCGCAAGCTTACCGGCACGATC 1317 >seq665 Length=19784 Score = 192 bits (212), Expect = 3e-44 Identities = 279/391 (71%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 64460 CAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTC 64519 ||||| ||||||||||||||| ||| ||| | |||||| || ||| || Sbjct 7 CAGGCGCTGCGCAAGCTCACCGCCACGATCAAGAAGACCAACTGCATGGTCATCTTCATC 66 Query 64520 AACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGC 64579 |||||| | ||| |||||||||| || | | |||| |||||||||||| ||| Sbjct 67 AACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCC---CGAGACCACCACCGGC 123 Query 64580 GGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAG 64639 ||||| || ||| ||||||||| || || ||| |||| |||| |||| || |||| Sbjct 124 GGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCATC 183 Query 64640 AAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTG 64699 ||| | ||||| ||||| |||||||| ||| ||| |||||||||||||||||| || Sbjct 184 AAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTG 243 Query 64700 GCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAG 64759 || || ||| | | || |||||| | || ||| ||| |||||||||||||| || Sbjct 244 GCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCGAA 303 Query 64760 GTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 64818 | ||| || ||||| ||| ||| ||| || | | ||||||| |||||||||| Sbjct 304 GGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGGTA 362 Query 64819 CAAGTACGGGGACAAGAACGTCGCCCAGGGC 64849 | ||| || | |||| ||| ||||||| Sbjct 363 CGCCTACAAGGGCGAGAAGATCGGCCAGGGC 393 >seq183 Length=814 Score = 188 bits (208), Expect = 3e-43 Identities = 294/417 (71%), Gaps = 10/417 (2%) Strand=Plus/Minus Query 64065 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 64124 |||||||||| | | ||||||| ||| |||||| |||| || ||| | ||||| | Sbjct 412 CCACCGGCTCGCTGGGGCTGGACGTCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCG 353 Query 64125 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 64184 || | || ||||||||||| ||||| ||||| ||| | || ||| || || | | | Sbjct 352 TGATCGAGATCTACGGCCCGGAATCGTCAGGCAAGACCACGCTGACGCTGCAGGTCATCG 293 Query 64185 CCAATGCGCAGA---AGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 64241 || | |||| ||||||| || | ||||| | ||||||| |||||| | |||| Sbjct 292 CCGAGATGCAGCGCCAGGCCGG---CACCTGCGCCTTCGTCGACGCCGAGCACGCGCTGG 236 Query 64242 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 64301 || | ||||||| || ||| || || |||| | | || || | ||||||| Sbjct 235 ACACCCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGAGCTGCTGATCAGCCAGCCGG 176 Query 64302 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC-- 64359 |||| ||||||||||| ||||||||||| ||| ||| || || ||| || ||| Sbjct 175 ACACCGGCGAGCAGGCGCTGGAGATCGTCGACAGCCTGGTGCGCTCCGGC--GCCGTCGA 118 Query 64360 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 64419 | | ||||| | ||||| |||||||| |||||||| |||||| |||| ||||| || Sbjct 117 CCTGATCGTCATCGACTCGGTGGCGGCGCTGGTGCCCAAGGCCGAGATCGAGGGCGAGAT 58 Query 64420 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCT 64476 || || | ||||||||| || ||||||||| ||||| |||||||||| Sbjct 57 GGGCGATTCGCTGCCCGGCCTGCAGGCCCGCCTCATGAGCCAGGCGCTGCGCAAGCT 1 >seq121 Length=664 Score = 149 bits (164), Expect = 3e-31 Identities = 209/293 (71%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 64534 GAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAG 64593 |||||||||| ||| |||||| || ||| || || || |||||||| || ||| Sbjct 7 GAAGATCGGC---GTGATGTACGGCTCGCCCGAAACGACGACCGGCGGCAATGCGCTGAA 63 Query 64594 GTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGA 64653 |||||||| || ||||| | || || || ||||||| | | | ||||| |||| || Sbjct 64 ATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATCGGCTCGGTCAAGGACCGCGAGGA 123 Query 64654 GGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 64713 || |||||||| ||||| |||||||| || ||||||||| | || |||||| | Sbjct 124 AGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAGAACAAGGTCGCGCCGCCGTTCAA 183 Query 64714 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGA 64773 | | ||| ||| | || ||| ||| |||||||| || || ||| || |||| Sbjct 184 GCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATTTCCAAGCTGGGCGAGATCATCGA 243 Query 64774 CCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 64826 ||| | |||| | |||||||| ||||||||||| ||||||||| |||| Sbjct 244 CCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGCTCCTGGTTCAGCTACG 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232795471224764