Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq741 203 1e-47 seq2533 93.3 1e-14 >seq741 Length=35645 Score = 203 bits (224), Expect = 1e-47 Identities = 250/335 (75%), Gaps = 10/335 (3%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTG--TG-CGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCG 40146 |||||||||| ||||||| || || ||| | ||||| |||||| || | |||||| Sbjct 10689 GCCGAAGGTCGCGATCTGGCTGACGGCCTCG-CGGCC--GTACTTGTCCTTCACGTACTC 10633 Query 40147 GATGACCTCGCCGCGAC--GCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACG 40204 ||||||| | | || ||| | || |||||||||||| | ||| ||||| |||||| Sbjct 10632 GATGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACG 10575 Query 40205 CGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTG 40264 ||||| ||||||||||| |||||||| | || || || || ||||||||||||||| Sbjct 10574 CGCTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTG 10515 Query 40265 ATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCAC 40324 ||| ||| | ||||| |||||||| ||||| | || || || || || |||||| Sbjct 10514 ATCTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGG 10455 Query 40325 ACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAAG 40384 |||||| | |||||||||| |||||||||| | |||| |||||||| ||||| Sbjct 10454 CAGCCGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAAT 10395 Query 40385 CCCATCTGGATGATCATGTCGATCTCGTACTGGAG 40419 ||||||| | ||| | |||||||| ||| ||| Sbjct 10394 CCCATCTTCAGGATGGTCCCGATCTCGAACTCGAG 10360 Score = 140 bits (154), Expect = 1e-28 Identities = 222/315 (70%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 39033 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGCCCGTACGCCG 39092 ||||||||| ||||||| |||||| | | ||| |||| |||| ||| |||||| | Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651 Query 39093 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACA------ 39146 | | ||||| |||||||||| |||| || ||||| | | || ||| | | Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591 Query 39147 CCGCCTGGATG-GCGCTGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39205 |||||| |||| ||| | | | |||| ||||| | ||| |||| || | Sbjct 11590 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 11538 Query 39206 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGCAGGTCGGCC 39265 | || ||||| |||||| ||||||||||||||| ||||| ||||||||||| || Sbjct 11537 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 11478 Query 39266 TGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATG 39325 |||||| ||||||| | ||||||||||| | || | |||||| |||||||||| Sbjct 11477 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 11418 Query 39326 ATGAGCCCGTACGTC 39340 |||| ||||| ||| Sbjct 11417 ATGATTCCGTAGGTC 11403 >seq2533 Length=1848 Score = 93.3 bits (102), Expect = 1e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 40046 AGCACGCGGGCCGCGTCCTTCATCGCGTTGCGCGCCTTGATCCGGCCGAAGGTCCCGATC 40105 ||||||||| | | ||||||| | | ||||||||| | | |||||||| |||| Sbjct 740 AGCACGCGGCCGGTATCCTTCAGCACCGCGCGCGCCTTCAGCTTACCGAAGGTGATGATC 681 Query 40106 TGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGACGC 40165 || ||||||| | | ||| || ||||| ||||| ||||| ||||||||||| ||| Sbjct 680 TGGGCGACCTGATTGCGCCCATATTTCTCCTGCACGTAGCGGATCACCTCGCCGCGCCGC 621 Query 40166 CGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCTC 40209 || ||| ||||| || | ||||||||| || ||||| || Sbjct 620 GTTTCGCAGAAATCGATATCGAAGTCGGGCATAGAGACGCGTTC 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160401211253976