Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq1332 120 2e-22 seq441 87.8 1e-12 >seq1332 Length=137326 Score = 120 bits (132), Expect = 2e-22 Identities = 131/172 (76%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 96683 TTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGA 96742 |||| ||||| ||||| |||| || || || || |||||||| |||||||||| || Sbjct 113335 TTGGCCTTGATCAGGCCGGTGATCACGTCGACCGAAGGCCGCTGGGTCGCCAGGATCAGG 113394 Query 96743 TGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTC 96802 || || ||||| |||||||||||||| || | ||| | ||| | |||| || ||| Sbjct 113395 TGGATGCCGGCGGCGCGCGCCTTCTGCGCCAGGCGAGCGATGAGCTCTTCGA--TC-TTC 113451 Query 96803 TTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGT 96854 ||| | ||||||| ||||| ||||||||||||| ||| |||||||||| Sbjct 113452 TTGCCCACCACCATCATCAGGTCGGCGAGTTCGTCGATCACCACCACGATGT 113503 Score = 100 bits (110), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 96965 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACCATC 97024 ||||| |||||||| || ||||| ||||| || | ||| | | |||| |||| Sbjct 113701 TCGGTCACCACCGGTGCCAGCAGGTGCGGGATGCCCTCGTAGACCGACATCTCCAGCATC 113760 Query 97025 TTCGGGTCGATCATGATGAGTTTGAC-CCGATCAGGATT-GGCTCGGTAGAGCATGGAAA 97082 |||||||||||||| | || ||| || | | || ||| ||| |||| || | Sbjct 113761 TTCGGGTCGATCATCAGCAGGCGGACATCG--CGTGCTTCGGCCTTGTAAAGCAGCGACA 113818 Query 97083 CCAGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGT 97142 | ||||| ||||||| | ||||| || |||||||||| ||| |||||||||| || Sbjct 113819 GGATCATCGCGTTGATGCCGACCGACTTGCCGGATCCGGTGGTGCCGGCCACCAGCACGT 113878 Query 97143 GCGGCATTTTGGCCAGGT 97160 ||||||| |||||||||| Sbjct 113879 GCGGCATCTTGGCCAGGT 113896 >seq441 Length=3058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 96676 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 96735 ||||| ||| | ||||| | ||| |||| || || || ||||| ||||||||||||| Sbjct 1523 CGGCAGGTTCGCCTTGATCACGCCGGTGATGACGTCGACCGAGGGGCGCTGCGTCGCCAT 1582 Query 96736 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 96795 || ||| || || || || ||||||||||| || |||| ||| || | || || Sbjct 1583 GATGAGGTGGATGCCCGCCGCGCGCGCCTTTTGCGCGAGGCGCTGGATCAGGAATTCCAC 1642 Query 96796 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGAT 96852 ||| |||| || |||||| ||||| || || |||||||| | || ||||| Sbjct 1643 TTC---CTTGCCCGCGGTCATCATCAGGTCCGCAAGCTCGTCGACGATCACGACGAT 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351223539430404