Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq741 161 3e-35 >seq741 Length=35645 Score = 161 bits (178), Expect = 3e-35 Identities = 235/330 (71%), Gaps = 4/330 (1%) Strand=Plus/Minus Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057 ||| | ||||||||||| ||| || | ||||||||| || | |||||| ||| Sbjct 10688 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 10629 Query 39058 ACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCT 39115 || | | ||| | | | || |||||||||||| | ||| ||||| || || |||| Sbjct 10628 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 10571 Query 39116 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39175 | ||||||||||| |||||||| | || || ||| ||| || |||||||||||| Sbjct 10570 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 10511 Query 39176 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGC 39235 ||| | || || ||||||| || || | || || || || ||||||||| || Sbjct 10510 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 10451 Query 39236 CGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCA 39295 |||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| |||| Sbjct 10450 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 10391 Query 39296 TCTGGTTGATCATGTCGATCTCGTACTCGA 39325 ||| ||| | |||||||| |||||| Sbjct 10390 TCTTCAGGATGGTCCCGATCTCGAACTCGA 10361 Score = 120 bits (132), Expect = 1e-22 Identities = 216/311 (69%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651 Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38057 | | ||||| |||||||||| |||| || ||||| | | || ||| | | | | Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591 Query 38058 CCGGATGGCAGCCTCCGAGTAGCCTCGCT-CGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116 ||| | ||| || | || || ||| ||| ||| | |||| || | | Sbjct 11590 CCGCCTTCT--CCTGCGCGATCCCATTCTTCGC-CGCGCCCGCCCGGAAAATCTCCCGGT 11534 Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176 || ||||| | |||||| ||||||||||||||| || || || || ||||| || | Sbjct 11533 GCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGC 11474 Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236 | || ||||| ||| ||||||||||||| | || | |||||| |||||||||| |||| Sbjct 11473 CCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGA 11414 Query 38237 GCCCGAAGGTC 38247 ||| ||||| Sbjct 11413 TTCCGTAGGTC 11403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159710033612568