Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq741 161 3e-35
>seq741
Length=35645
Score = 161 bits (178), Expect = 3e-35
Identities = 235/330 (71%), Gaps = 4/330 (1%)
Strand=Plus/Minus
Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057
||| | ||||||||||| ||| || | ||||||||| || | |||||| |||
Sbjct 10688 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 10629
Query 39058 ACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCT 39115
|| | | ||| | | | || |||||||||||| | ||| ||||| || || ||||
Sbjct 10628 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 10571
Query 39116 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39175
| ||||||||||| |||||||| | || || ||| ||| || ||||||||||||
Sbjct 10570 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 10511
Query 39176 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGC 39235
||| | || || ||||||| || || | || || || || ||||||||| ||
Sbjct 10510 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGCAGC 10451
Query 39236 CGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCA 39295
|||| | ||| |||||| |||||||||| | |||| ||||||||| ||||| ||||
Sbjct 10450 CGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATCCCA 10391
Query 39296 TCTGGTTGATCATGTCGATCTCGTACTCGA 39325
||| ||| | |||||||| ||||||
Sbjct 10390 TCTTCAGGATGGTCCCGATCTCGAACTCGA 10361
Score = 120 bits (132), Expect = 1e-22
Identities = 216/311 (69%), Gaps = 6/311 (2%)
Strand=Plus/Minus
Query 37940 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCG 37999
||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| |
Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651
Query 38000 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACACCGC-- 38057
| | ||||| |||||||||| |||| || ||||| | | || ||| | | | |
Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591
Query 38058 CCGGATGGCAGCCTCCGAGTAGCCTCGCT-CGCTCGCCCCCTTCTGGAAGTTCACGAACT 38116
||| | ||| || | || || ||| ||| ||| | |||| || | |
Sbjct 11590 CCGCCTTCT--CCTGCGCGATCCCATTCTTCGC-CGCGCCCGCCCGGAAAATCTCCCGGT 11534
Query 38117 CCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGAC 38176
|| ||||| | |||||| ||||||||||||||| || || || || ||||| || |
Sbjct 11533 GCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGC 11474
Query 38177 CGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGA 38236
| || ||||| ||| ||||||||||||| | || | |||||| |||||||||| ||||
Sbjct 11473 CCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGA 11414
Query 38237 GCCCGAAGGTC 38247
||| |||||
Sbjct 11413 TTCCGTAGGTC 11403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159710033612568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |