Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028910.1 Length=55617 Score E Sequences producing significant alignments: (Bits) Value seq559 351 4e-92 >seq559 Length=35318 Score = 351 bits (388), Expect = 4e-92 Identities = 634/911 (70%), Gaps = 32/911 (4%) Strand=Plus/Plus Query 42316 GGGCAG-GGCATGAACCTGCAGC---AGGCCCACACCTGTGTGTACATCGGCATCACGCA 42371 |||||| |||| |||||||||| | |||| | |||| | ||||| | | || Sbjct 24594 GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGT-AGGCT 24652 Query 42372 -CAAGTTCAACGATCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATC 42430 |||||||||||| | |||||| | |||||| | ||||| ||| || | || | Sbjct 24653 TCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712 Query 42431 CCTGCACAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCG 42490 | | | | | | |||||| ||||||| |||||||| || ||||| | | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 42491 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACG 42550 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 42551 GACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCGGGTGCGAGCGCATC 42609 | || | | || | || ||| | | |||| | ||||| ||||| |||||| Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 42610 GAAGCATCCGGCGAGGGGTGGGTGTTCGTCAACAACGACTGCGTACTCGAAACCGAGAGA 42669 || | | ||||| || ||| | | | ||||||||||||| || | | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 42670 ATGGCAGACGATTCGGTGGATCTGATTGTCACCAGTATTCCGTTCTCCAACCACTACGAG 42729 ||| || | ||||| || ||||| |||||| || |||||| ||||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 42730 TACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 42789 |||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 42790 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCCGGGCGGATCTACGCCTG- 42848 ||||| | || || ||| | ||||| || || ||||| || ||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 42849 --CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTG 42906 |||||| |||||||| ||| ||||||| || ||||||| || ||||| ||||| Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 42907 TCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTC 42963 |||||||||||| || ||| ||| ||| ||||||||| | | | | Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 42964 GGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 43023 ||||||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 43024 TGGT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGGGTCGGCTCCCCGGAATACGTT 43080 | || ||| | ||| || |||| ||| |||||||| |||| ||| |||||||| Sbjct 25303 TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTG 25362 Query 43081 CTGCTGTTCCATAAACCGCAGACAGACAGGTCGAAGGGATACGCCGACACACCCGTCGCC 43140 |||||| | | || ||||| | ||| | || || || |||||||| || ||| || Sbjct 25363 CTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACC 25422 Query 43141 AAATCCAAGGACGA---CTACACCCGGGCACGTTGGCAGGTGGACGCGCACGCGTTCTGG 43197 || || | ||| ||||| || ||| || |||||||| ||||| ||||| |||||| Sbjct 25423 AA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGG 25479 Query 43198 CGATCGAGCGG 43208 || || ||||| Sbjct 25480 CGCTCCAGCGG 25490 Score = 295 bits (326), Expect = 2e-75 Identities = 326/429 (76%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 41542 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 41601 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 41602 GCCGTCTCACTCGATGAGGCGAGCGTGCTGCGGTCTTTCGGGTCCAAGACCTACCAGTCG 41661 |||||| || || ||||||||| | || || || |||||||| ||||||| |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 41662 TTCCTAGAGCTGTTCGACGCGGTGCCGTACCGGTACGTCGCCACCGCCACGCCGTCACCG 41721 ||||| ||| ||||| |||||||||||||| | ||||| |||||||| || || || Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 41722 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGGGCG 41781 ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 41782 GCGCTCACGCGTTGGTTCCAACGGGAC-TCGACGAAGGCGAACAACCTCACCCTCTACCC 41840 |||||||| || | ||||| || || ||| ||||||| | | |||||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082 Query 41841 GCATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAATCACC 41900 ||| || ||||| |||||||||||||||||||| | ||||| | ||| |||| || Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142 Query 41901 GGCCGACCTCGG--TCA-CGACGCCACCGGCTATGACCTTCCGCCGCTGGAGGTGCTGTG 41957 | ||||||||| ||| |||| |||||| || || || |||| |||| || Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 41958 GCATGAGGT 41966 ||| ||||| Sbjct 23200 GCACGAGGT 23208 Score = 127 bits (140), Expect = 7e-25 Identities = 198/277 (71%), Gaps = 22/277 (8%) Strand=Plus/Plus Query 43360 ACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGGCACGACGTGA 43414 || |||||||| ||||| ||||| | | |||| || |||||||| ||||| | Sbjct 25787 ACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGGGACGACATCG 25841 Query 43415 ACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAAATGCATGTGT 43471 |||||| || | ||||| |||||| |||||| || | | | ||| || | Sbjct 25842 TGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAGAAGCACGTCT 25898 Query 43472 GCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGAGT 43531 ||||||| |||||||||||||| |||||||||||| || | ||| | | |||||| Sbjct 25899 GCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGAGC 25958 Query 43532 TGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACTT---G 43588 |||||||||| |||||| |||| || |||||||||||| |||| || || ||| | Sbjct 25959 TGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGCCG 26015 Query 43589 GTCGGCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 43625 |||| |||||| || ||| || || |||| ||| Sbjct 26016 GTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177847046906552