Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq2071 84.2 3e-11 >seq2071 Length=31734 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 181367 CACCTGATCGAAGTGATTGTTGTAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCC 181426 |||||| ||| ||| ||| ||||||||||| || || | | | ||| | || || Sbjct 11459 CACCTGCTCGTGGTGGTTGCTGTAGATGTGGCAGTCGCCGCCGGTCCAGATGAAGTCGCC 11518 Query 181427 GACTTCAAGACCACATTCCAGCGCGATCAGATGTGTCAGGAGCGCGTAAGAGGCGATGTT 181486 ||| | || | || | | ||||||||| || || || |||||||| ||||||||| Sbjct 11519 GACCGCCAGGTCGCACTGCTGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTT 11578 Query 181487 GAAGGGAAGCCCCAAGAAGACGTC--CACGGACCGCTGATTCCAAAGGCAGGACAGTTTG 181544 ||| || | |||| ||||| ||| ||| | ||||| | | |||| ||||| ||| Sbjct 11579 GAACGGCACGCCCAGGAAGATGTCGGCACTG--CGCTGGTACAGCTGGCACGACAGCTTG 11636 Query 181545 TCAT-TGCGAACATAGAACTGGAATCCGTAGTGGCACGGCGGCAAAGCCAT 181594 | | ||| || ||||||||||| |||||| |||| || ||||| Sbjct 11637 CCGTCCGCG-ACGTAGAACTGGAAGAACGCGTGGCAGGGCGCCAGCGCCAT 11686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661331080909920