Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_028946.1
Length=59652
Score E
Sequences producing significant alignments: (Bits) Value
seq559 349 1e-91
>seq559
Length=35318
Score = 349 bits (386), Expect = 1e-91
Identities = 596/849 (70%), Gaps = 24/849 (3%)
Strand=Plus/Plus
Query 45301 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 45360
|||||||||||| | |||||| | |||||| | ||||| ||| || | || ||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713
Query 45361 CTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 45420
| | | | | | |||||| ||||||| |||||||| || ||||| | | | | |
Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773
Query 45421 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACGG 45480
||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || ||
Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833
Query 45481 ACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCGGATGTGAGCGCATCG 45539
|| | | || | || ||| | | |||| | ||||| ||||| ||||| |
Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892
Query 45540 AAGCATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCAAGAGCA 45599
| | | || || || ||| | | || ||||||||||||| | || | |
Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952
Query 45600 TGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 45659
||| || | ||||| || ||||| |||||| ||| |||||| ||||||||||||||
Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012
Query 45660 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGAGCACTTCTGGCAGCAGA 45719
||||||||||||||||||||||||||||||| ||||| ||| ||| |||| |||||
Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072
Query 45720 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCGCCGGGCCGTATCTACGCCTG-- 45777
|||| | || || ||| | ||||| || || |||||||||| | ||||||
Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129
Query 45778 -CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACGGTGT 45836
|||||| |||||||| ||| ||||||| || ||||||| || ||||| || ||
Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189
Query 45837 CCCCGTTCCACGCCGAGGCGATCTTCCAC-GGACGCAAACACGGCTTCGACTACCTCGGC 45895
|||||||||||| || ||| ||| | || ||||||||| | | | | |||
Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-GCCACGGCTTCCAGTTCATGGGC 25248
Query 45896 ATGATCACCGTCGTCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCTGGGCTGG 45955
|||||||||||||||||||| || || || || ||||||||||| ||||| ||| | |
Sbjct 25249 ATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCG 25305
Query 45956 TCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCT 46011
| | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| | ||
Sbjct 25306 TAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCT 25364
Query 46012 GCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCAA 46071
|||| | | ||| ||||||| ||| | || || || |||||||| || ||||||||
Sbjct 25365 GCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCAA 25424
Query 46072 ATCCAAGGACGA---CTACACCCGTGCCCGTTGGCAGGTGGACGCGCACGCATTCTGGCG 46128
|| | ||| ||||| || || || |||||||| ||||| ||||| ||||||||
Sbjct 25425 --GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGCG 25481
Query 46129 CTCGAGCGG 46137
||| |||||
Sbjct 25482 CTCCAGCGG 25490
Score = 280 bits (310), Expect = 6e-71
Identities = 323/429 (75%), Gaps = 8/429 (2%)
Strand=Plus/Plus
Query 44471 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44530
|||| || ||||| || ||||| ||||||||||| ||| | ||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 44531 GCCGTTTCACTCGACGAAGCGAGCGTGCTGCGCTCGTTCGGGTCTAAGACGTACCAGTCG 44590
||||| || ||||| |||||| | || |||||||||||||| ||||| | |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 44591 TTCCTGGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCGACGGCCACGCCATCGCCG 44650
|||||| ||| ||||| |||||||| ||||| | |||||||| ||||| || |||||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 44651 AACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGACACCGGTGCG 44710
||||| ||||||||||||||||| ||||| |||| ||||| ||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 44711 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCC 44769
|||||||| || | |||||||| || ||| |||||| | | |||||||| |||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082
Query 44770 ACACAAGGAGCGTGAGTTCTTCTTGTGGCTCAACACCTGGGCGGCGTTCGTGCAATCCCC 44829
|||||||| | ||||||| ||||||| || | |||||| | ||| |||| |||
Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142
Query 44830 GGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGTTGTG 44886
| |||||||| ||| |||| |||||| || ||||| |||| ||| ||
Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199
Query 44887 GCATGAGGT 44895
||| |||||
Sbjct 23200 GCACGAGGT 23208
Score = 111 bits (122), Expect = 6e-20
Identities = 105/133 (79%), Gaps = 6/133 (5%)
Strand=Plus/Plus
Query 47392 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 47451
||||||| | |||||||||||||| |||||||||||| || | ||| | | |||||
Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956
Query 47452 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 47509
| |||||||||| |||||| |||| || |||||||||||| |||| || || |||
Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013
Query 47510 -GGTCGCCGCGGC 47521
||||||||||||
Sbjct 26014 CGGTCGCCGCGGC 26026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190758629235632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |