Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_028946.1 Length=59652 Score E Sequences producing significant alignments: (Bits) Value seq559 349 1e-91 >seq559 Length=35318 Score = 349 bits (386), Expect = 1e-91 Identities = 596/849 (70%), Gaps = 24/849 (3%) Strand=Plus/Plus Query 45301 CAAGTTCAACGATCTAATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 45360 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCC 24713 Query 45361 CTGCAAAGCCCATTTGATCCACTCCGAAACCGAGCGGGAAGTGGTGCGGGTCATCCGCGA 45420 | | | | | | |||||| ||||||| |||||||| || ||||| | | | | | Sbjct 24714 GGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGC 24773 Query 45421 GAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCGACATCATTCATGAGTACGG 45480 ||| ||||| | ||| ||| ||| | ||| |||| ||||| | || || || Sbjct 24774 GAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGG 24833 Query 45481 ACTTGACCCCGAAG-CGATCTCCGAGGCGCTGCAACGCTCCATCGGATGTGAGCGCATCG 45539 || | | || | || ||| | | |||| | ||||| ||||| ||||| | Sbjct 24834 CCTGCAGCATGACGTCGCCCTCGGCG-CGCTCAAGCGCTCGATCGGCGTCGAGCGGCAGG 24892 Query 45540 AAGCATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCAAGAGCA 45599 | | | || || || ||| | | || ||||||||||||| | || | | Sbjct 24893 AGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGGC 24952 Query 45600 TGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGT 45659 ||| || | ||||| || ||||| |||||| ||| |||||| |||||||||||||| Sbjct 24953 TGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAGT 25012 Query 45660 ACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGAGCACTTCTGGCAGCAGA 45719 ||||||||||||||||||||||||||||||| ||||| ||| ||| |||| ||||| Sbjct 25013 ACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAGA 25072 Query 45720 TGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCGCCGGGCCGTATCTACGCCTG-- 45777 |||| | || || ||| | ||||| || || |||||||||| | |||||| Sbjct 25073 TGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGCA 25129 Query 45778 -CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCCGGCGTGCCCACGGTGT 45836 |||||| |||||||| ||| ||||||| || ||||||| || ||||| || || Sbjct 25130 TCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTCA 25189 Query 45837 CCCCGTTCCACGCCGAGGCGATCTTCCAC-GGACGCAAACACGGCTTCGACTACCTCGGC 45895 |||||||||||| || ||| ||| | || ||||||||| | | | | ||| Sbjct 25190 ATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-GCCACGGCTTCCAGTTCATGGGC 25248 Query 45896 ATGATCACCGTCGTCACCGATGTGGTCCGGGAAAACAACCAGACGTACCGGCTGGGCTGG 45955 |||||||||||||||||||| || || || || ||||||||||| ||||| ||| | | Sbjct 25249 ATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG---TCG 25305 Query 45956 TCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACATTCT 46011 | | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| | || Sbjct 25306 TAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCT 25364 Query 46012 GCTGTTCCACAAACCGCAAACAGACAGGTCGAAGGGATACGCCGACACACCCGTCACCAA 46071 |||| | | ||| ||||||| ||| | || || || |||||||| || |||||||| Sbjct 25365 GCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCAA 25424 Query 46072 ATCCAAGGACGA---CTACACCCGTGCCCGTTGGCAGGTGGACGCGCACGCATTCTGGCG 46128 || | ||| ||||| || || || |||||||| ||||| ||||| |||||||| Sbjct 25425 --GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCTGGCG 25481 Query 46129 CTCGAGCGG 46137 ||| ||||| Sbjct 25482 CTCCAGCGG 25490 Score = 280 bits (310), Expect = 6e-71 Identities = 323/429 (75%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 44471 ATCTATCTCACCAACTATGAGAGTGTCCGCGACGGAAAGTTGGACCCGACACTGTTCACG 44530 |||| || ||||| || ||||| ||||||||||| ||| | ||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 44531 GCCGTTTCACTCGACGAAGCGAGCGTGCTGCGCTCGTTCGGGTCTAAGACGTACCAGTCG 44590 ||||| || ||||| |||||| | || |||||||||||||| ||||| | |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 44591 TTCCTGGAGCTGTTCGACGCGGTGCCCTACCGGTACGTCGCGACGGCCACGCCATCGCCG 44650 |||||| ||| ||||| |||||||| ||||| | |||||||| ||||| || ||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 44651 AACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGACACCGGTGCG 44710 ||||| ||||||||||||||||| ||||| |||| ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 44711 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCC 44769 |||||||| || | |||||||| || ||| |||||| | | |||||||| ||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082 Query 44770 ACACAAGGAGCGTGAGTTCTTCTTGTGGCTCAACACCTGGGCGGCGTTCGTGCAATCCCC 44829 |||||||| | ||||||| ||||||| || | |||||| | ||| |||| ||| Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142 Query 44830 GGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGTTGTG 44886 | |||||||| ||| |||| |||||| || ||||| |||| ||| || Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 44887 GCATGAGGT 44895 ||| ||||| Sbjct 23200 GCACGAGGT 23208 Score = 111 bits (122), Expect = 6e-20 Identities = 105/133 (79%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 47392 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 47451 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956 Query 47452 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCACTGAAACTT-- 47509 | |||||||||| |||||| |||| || |||||||||||| |||| || || ||| Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---GATCCTTGC 26013 Query 47510 -GGTCGCCGCGGC 47521 |||||||||||| Sbjct 26014 CGGTCGCCGCGGC 26026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190758629235632