Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2374 122 8e-23 seq2071 109 5e-19 >seq2374 Length=591842 Score = 122 bits (134), Expect = 8e-23 Identities = 194/276 (70%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 6749 TGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATC 6808 || ||||| |||||||||||| |||||| |||||||||||||| || | |||| Sbjct 120170 TGACACGGCGGGAGCGCCATCTTCTTCAGATCCGCCGGGTTCCACGCGCTCAGGATGATC 120229 Query 6809 CTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCC 6868 | || |||| || ||| |||||| | | ||| | | | ||| ||| | ||| Sbjct 120230 CGCCTATCATAGGGATTCTCCTTCAACTTCCGCACCACCTCCGCGATCTGATCCACACCC 120289 Query 6869 TGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAA 6927 | ||||| ||| |||| |||||| || | |||||| || |||||||| | ||| ||||| Sbjct 120290 TTTCCCGCATAATCCGTCTTCGCATCCAC-ATACTCTGCACCAAAGTGACGCCATTGGAA 120348 Query 6928 CCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAA 6987 ||||||||| ||||||| ||||| | || ||| | || || ||| ||||| Sbjct 120349 CCCGTAGACGGGGCCCAGATCGCCTACTTCGCGATGCGAGAGGCCGACGGAGTCGAGAAA 120408 Query 6988 GTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 || | | ||||| | |||||||| ||||| || Sbjct 120409 CTCCCTACTCCCGTTCCCATCCCAGATTTTCACGCC 120444 Score = 122 bits (134), Expect = 8e-23 Identities = 194/276 (70%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || ||||| |||||||| | ||||| | | || ||||| ||| || || | Sbjct 120444 GGCGTGAAAATCTGGGATGGGAACGGGAGTAGGGAGTTTCTCGACTCCGTCGGCCTCTCG 120385 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 ||| || | ||||| ||||||| |||||||||||||| ||| | |||||||| || Sbjct 120384 CATCGCGAAGTAGGCGATCTGGGCCCCGTCTACGGGTTCCAATGGCGTCACTTTGGTGCA 120325 Query 34442 GAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGT 34500 |||||| | || |||||| |||| ||| ||||| |||| | ||| ||| | | | || Sbjct 120324 GAGTAT-GTGGATGCGAAGACGGATTATGCGGGAAAGGGTGTGGATCAGATCGCGGAGGT 120266 Query 34501 GATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 | | | |||||| ||| || |||| || ||||| | || ||||||||||||| Sbjct 120265 GGTGCGGAAGTTGAAGGAGAATCCCTATGATAGGCGGATCATCCTGAGCGCGTGGAACCC 120206 Query 34561 GAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCA 34596 | |||||| |||||||||||| ||||| || Sbjct 120205 GGCGGATCTGAAGAAGATGGCGCTCCCGCCGTGTCA 120170 >seq2071 Length=31734 Score = 109 bits (120), Expect = 5e-19 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||| |||||| || ||||| || || |||||||||||||| || | Sbjct 11538 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 11597 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| | || || || |||||||| ||||||| || | |||||||||||| ||| Sbjct 11598 ATGTCGGCACTGCGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACTGG 11657 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGC 6797 ||| | |||||| || | ||||||||| |||| ||| | |||||| |||| Sbjct 11658 AAGAACGCGTGGCAGGGCGCCAGCGCCATCTTCGGGATGTCCGCCACGTTCCAGGCGC 11715 Score = 109 bits (120), Expect = 5e-19 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 34548 GCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCC 34607 |||| |||||| | ||| |||| ||||||||| | || |||||| | ||| || Sbjct 11715 GCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCC 11656 Query 34608 AATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGG 34667 | |||||||||||| | || ||||||| |||||||| || || || | ||||| Sbjct 11655 AGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCT 11596 Query 34668 GGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 | || |||||||||||||| || || ||||| || |||||| |||||||||| || Sbjct 11595 TCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCA 11538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448247136665280