Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq934 161 2e-34 seq1640 107 4e-18 >seq934 Length=187681 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || || ||||| || || | || || | |||||| Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || |||||||| | |||||| ||||||||||| | || ||||||||| Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || ||| | ||||||||||||||||| || Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||||||||| || || | |||||| Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 161 bits (178), Expect = 2e-34 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || || || ||||||||||| | || |||| || || Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | || || || || ||||| | ||||||||||| Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||||||| |||||||| || || || || || |||||||| ||| Sbjct 9677 TGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTC 9618 Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104 ||||| || |||||||| |||| Sbjct 9617 TTTCCGGTAAGAGTCTTGACAA 9596 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| ||||| ||||| || || | || || | |||||| Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || || ||||| ||||| || |||| ||| |||||||| Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| ||| ||| ||||| ||||| ||||| || |||||| || || ||||| ||| Sbjct 9905 TGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTC 9846 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | ||||| || || | |||||| Sbjct 9845 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 127 bits (140), Expect = 5e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983 || || ||||||||||| || | ||| || | |||||||| || ||||| || || || Sbjct 10232 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAA 10173 Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT-TTCACGTT 211042 || || ||||||||||| || || | || ||||| || ||||| |||||| |||||||| Sbjct 10172 ATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGAT-TTTTGTCTTCACGTT 10114 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| ||||| ||| ||| ||||| | || || ||||| || || | ||||| || Sbjct 10113 GTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCAC 10054 Query 211103 AAACACCTGCAT 211114 ||| | ||||| Sbjct 10053 AAATATTTGCAT 10042 >seq1640 Length=153026 Score = 107 bits (118), Expect = 4e-18 Identities = 136/183 (74%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 || || || |||||||| | ||||| | | ||| || || |||||||| || || || || Sbjct 9684 TTCTGAATATTATAATCGCTCAAGG-TGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAAT 9742 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 | || || ||||||||||| | |||||||||||||| ||||| || || || || Sbjct 9743 CAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTC 9802 Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||| ||||| ||| || |||||||| ||||| ||||| || ||||| ||||| || Sbjct 9803 GATTGTGTC---GCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 9859 Query 211103 AAA 211105 || Sbjct 9860 GAA 9862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159111544146260