Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq934 161 2e-34
seq1640 107 4e-18
>seq934
Length=187681
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | |||||| || ||||| || || ||||| || || | || || | ||||||
Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| | |||||| ||||||||||| | || |||||||||
Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || ||| | ||||||||||||||||| ||
Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||||||||| || || | ||||||
Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
Score = 161 bits (178), Expect = 2e-34
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || || || ||||||||||| | || |||| || ||
Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| | || || || || ||||| | |||||||||||
Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||||||| |||||||| || || || || || |||||||| |||
Sbjct 9677 TGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTC 9618
Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104
||||| || |||||||| ||||
Sbjct 9617 TTTCCGGTAAGAGTCTTGACAA 9596
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || || ||||| ||||| ||||| || || | || || | ||||||
Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || || ||||| ||||| || |||| ||| ||||||||
Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| ||| ||| ||||| ||||| ||||| || |||||| || || ||||| |||
Sbjct 9905 TGGATTTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGTC 9846
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | ||||| || || | ||||||
Sbjct 9845 TTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 127 bits (140), Expect = 5e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983
|| || ||||||||||| || | ||| || | |||||||| || ||||| || || ||
Sbjct 10232 TCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCTTCAAGTTGCTTACCAGCAAAA 10173
Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT-TTCACGTT 211042
|| || ||||||||||| || || | || ||||| || ||||| |||||| ||||||||
Sbjct 10172 ATGAGACGTTGTTGGTCTGGTGGGATACCCTCCTTATCTTGGAT-TTTTGTCTTCACGTT 10114
Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||||| ||||| ||| ||| ||||| | || || ||||| || || | ||||| ||
Sbjct 10113 GTCGATTGTGTCTGAGGATTCGACCTCTAACGTAATAGTCTTGCCGGTCAATGTCTTCAC 10054
Query 211103 AAACACCTGCAT 211114
||| | |||||
Sbjct 10053 AAATATTTGCAT 10042
>seq1640
Length=153026
Score = 107 bits (118), Expect = 4e-18
Identities = 136/183 (74%), Gaps = 8/183 (4%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985
|| || || |||||||| | ||||| | | ||| || || |||||||| || || || ||
Sbjct 9684 TTCTGAATATTATAATCGCTCAAGG-TGCGTCCGTCCTCGAGCTGCTTTCCGGCAAAAAT 9742
Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045
| || || ||||||||||| | |||||||||||||| ||||| || || || ||
Sbjct 9743 CAAACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGCTCTTGACATTGTC 9802
Query 211046 GATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102
||| ||||| ||| || |||||||| ||||| ||||| || ||||| ||||| ||
Sbjct 9803 GATTGTGTC---GCTCGACTCCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 9859
Query 211103 AAA 211105
||
Sbjct 9860 GAA 9862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159111544146260
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