Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq934 143 6e-29 seq1046 98.7 2e-15 seq1954 91.5 4e-13 >seq934 Length=187681 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| | ||||| ||| | ||| | || ||| || |||| || || |||| | || Sbjct 10263 ACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGT 10204 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| || || || ||||||||||| || || ||||| Sbjct 10203 GCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACC 10144 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| |||||||| ||| |||||| ||||| |||||||||| ||| || ||||| Sbjct 10143 CTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAA 10084 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || |||||||| ||||| || || | || | |||||| Sbjct 10083 CGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || || || || ||||| | ||||| || | | || | |||||| Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || ||||| ||||| || ||||| || ||||||||| Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906 Query 225622 TGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||||| || | | | ||||| |||||||| | ||| || || | ||||| || Sbjct 9905 TGGAT-TTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGT 9847 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || || | ||| | ||||| Sbjct 9846 CTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| |||||||| || || | || ||||| | | ||| | || || Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || || || || || || |||||||||||| Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||| |||||||| || || | ||||| || | ||||| ||| Sbjct 9677 TGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTC 9618 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||| || Sbjct 9617 TTTCCGGTAAGAGTCTT 9601 Score = 104 bits (114), Expect = 6e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || || | ||||| || | | ||| | |||||| Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| | ||||| ||||| || || || || |||||||| Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| || || || || || || | ||||| || Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | ||| || | ||| | ||||| Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 >seq1046 Length=23093 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || | ||| |||||| || || ||||| ||| ||||||||||||| ||||||||| Sbjct 359 ATGTCAAAGGTGGGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATCATCCACCGCT 300 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG- 7843 | | | |||||| || |||||||||| |||||||||| |||| | | |||| || Sbjct 299 TGTGCGGGTCCCCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGT 240 Query 7844 AATATTTACGCGTTAGCTT 7862 | || |||||||||||| Sbjct 239 CAACTTCACGCGTTAGCTT 221 >seq1954 Length=527115 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| |||||||| | | || | || || Sbjct 282714 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 282655 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| || ||||| ||||| || || || || ||||||||| Sbjct 282654 TCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 282595 Query 225622 TGGAT 225626 |||| Sbjct 282594 GGGAT 282590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192489579170456