Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq934 143 6e-29
seq1046 98.7 2e-15
seq1954 91.5 4e-13
>seq934
Length=187681
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| | ||||| ||| | ||| | || ||| || |||| || || |||| | ||
Sbjct 10263 ACGTAATCTCAAGACCAAGTGCAACGTACTTTCCTTCTGGATGTTATAGTCGGAAAGCGT 10204
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || ||||| ||||| || || || ||||||||||| || || |||||
Sbjct 10203 GCGGCCATCTTCAAGTTGCTTACCAGCAAAAATGAGACGTTGTTGGTCTGGTGGGATACC 10144
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| |||||||| ||| |||||| ||||| |||||||||| ||| || |||||
Sbjct 10143 CTCCTTATCTTGGATTTTTGTCTTCACGTTGTCGATTGTGTCTGAGGATTCGACCTCTAA 10084
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || |||||||| ||||| || || | || | ||||||
Sbjct 10083 CGTAATAGTCTTGCCGGTCAATGTCTTCACAAATATTTGCAT 10042
Score = 129 bits (142), Expect = 1e-24
Identities = 158/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || || || || || || ||||| | ||||| || | | || | ||||||
Sbjct 10025 AGGACGAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCTGAGAGTGTGCGACCATCT 9966
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || ||||| ||||| || ||||| || |||||||||
Sbjct 9965 TCAAGCTGCTTGCCGGCGAAAATTAGACGTTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 9906
Query 225622 TGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||| ||||| || | | | ||||| |||||||| | ||| || || | ||||| ||
Sbjct 9905 TGGAT-TTTTGTTTTAACGTTATCGATCGTGTCTGAAGATTCAACTTCAAGTGTGATTGT 9847
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || || | ||| | |||||
Sbjct 9846 CTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 9814
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| |||||||| || || | || ||||| | | ||| | || ||
Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| | || || || || || || || ||||||||||||
Sbjct 9737 TCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCT 9678
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||| |||||||| || || | ||||| || | ||||| |||
Sbjct 9677 TGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGGTC 9618
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || || | ||| ||
Sbjct 9617 TTTCCGGTAAGAGTCTT 9601
Score = 104 bits (114), Expect = 6e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || || | ||||| || | | ||| | ||||||
Sbjct 9501 AGAACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 9442
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||||||||||| | ||||| ||||| || || || || ||||||||
Sbjct 9441 TCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 9382
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||| || || || || || || | ||||| ||
Sbjct 9381 TGGATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCAACCTCGAGAGTGATGGTT 9322
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| | ||| || | ||| | |||||
Sbjct 9321 TTGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290
>seq1046
Length=23093
Score = 98.7 bits (108), Expect = 2e-15
Identities = 106/139 (76%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || | ||| |||||| || || ||||| ||| ||||||||||||| |||||||||
Sbjct 359 ATGTCAAAGGTGGGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATCATCCACCGCT 300
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG- 7843
| | | |||||| || |||||||||| |||||||||| |||| | | |||| ||
Sbjct 299 TGTGCGGGTCCCCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGT 240
Query 7844 AATATTTACGCGTTAGCTT 7862
| || ||||||||||||
Sbjct 239 CAACTTCACGCGTTAGCTT 221
>seq1954
Length=527115
Score = 91.5 bits (100), Expect = 4e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| |||||||| | | || | || ||
Sbjct 282714 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCGTCC 282655
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || ||||||||||| || ||||| ||||| || || || || |||||||||
Sbjct 282654 TCGAGCTGTTTGCCAGCGAAGATGAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 282595
Query 225622 TGGAT 225626
||||
Sbjct 282594 GGGAT 282590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192489579170456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |