Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2704 87.8 2e-12
>seq2704
Length=633058
Score = 87.8 bits (96), Expect = 2e-12
Identities = 292/449 (65%), Gaps = 4/449 (1%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| || ||||| ||| || ||||| || ||||| || || || || |
Sbjct 56140 AACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAG 56199
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
|||||| || ||||| || || || || || || || || || | || | | ||
Sbjct 56200 CGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAG 56259
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| |||||||| | ||| || ||||| || || || |||| |||||||| | |||| ||
Sbjct 56260 AGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCAT 56319
Query 4427 TCCAATTAAT-CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485
|| | | | || ||| || || | ||||| || |||| ||| || || ||||
Sbjct 56320 GCCGAGAAGGGCGCA-AGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTT 56378
Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAA-GTATCCAAACAAT 4544
||||||| | | | | | | | | | | || || || || |
Sbjct 56379 CTGTGATAACAGCCTCGACGGCCT-GGGGGCTCGGGCGGTGACGAAGGTGAGAGAAGAGA 56437
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
| ||| ||||| ||| || | || ||||| | | ||||||||| || || || ||
Sbjct 56438 AGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTG 56497
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
| || ||||| | || | ||| || ||||| || |||| |||||| || ||| ||
Sbjct 56498 AGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAA 56557
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTAC 4693
|| || || || ||||| ||||| || ||
Sbjct 56558 AAGATACCCTCAACGGCTGCAAAGGCAAC 56586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427035422487092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |