Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2704 87.8 2e-12 >seq2704 Length=633058 Score = 87.8 bits (96), Expect = 2e-12 Identities = 292/449 (65%), Gaps = 4/449 (1%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| || ||||| ||| || ||||| || ||||| || || || || | Sbjct 56140 AACACCAGCCTTCTGGTAGTCGCCGACGCGCTTCTCAAAGAAGTTTGTCTTACCGGACAG 56199 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 |||||| || ||||| || || || || || || || || || | || | | || Sbjct 56200 CGAAATGTTGTCCATGAAGTCGAATGGGTTCGTCGCATTATAGTACTTCTTATTACCAAG 56259 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| |||||||| | ||| || ||||| || || || |||| |||||||| | |||| || Sbjct 56260 AGCGACAAGCAACCTGTCGGCGACAAACTCGATGTATTGGCACATGAGTTTGGAGTTCAT 56319 Query 4427 TCCAATTAAT-CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 || | | | || ||| || || | ||||| || |||| ||| || || |||| Sbjct 56320 GCCGAGAAGGGCGCA-AGGAAGGGCATCGGTCAAGAATTCTTTTTCGATCTCGACAGCTT 56378 Query 4486 CTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAA-GTATCCAAACAAT 4544 ||||||| | | | | | | | | | | || || || || | Sbjct 56379 CTGTGATAACAGCCTCGACGGCCT-GGGGGCTCGGGCGGTGACGAAGGTGAGAGAAGAGA 56437 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 | ||| ||||| ||| || | || ||||| | | ||||||||| || || || || Sbjct 56438 AGACAGGCAAAGTCAGTGTGGAGGCCCTCGTCGCGGGAAATCAGTTCATTGGAGAAGGTG 56497 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 | || ||||| | || | ||| || ||||| || |||| |||||| || ||| || Sbjct 56498 AGGCCAGGCATAAGGCCACGCTTCTTCAGCCAGAAGATAGAGGCAAAAGAGCCACTGAAA 56557 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTAC 4693 || || || || ||||| ||||| || || Sbjct 56558 AAGATACCCTCAACGGCTGCAAAGGCAAC 56586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427035422487092