Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq559 313 8e-81 seq828 161 3e-35 seq1459 127 7e-25 >seq559 Length=35318 Score = 313 bits (346), Expect = 8e-81 Identities = 580/840 (69%), Gaps = 16/840 (2%) Strand=Plus/Plus Query 1166 GGCAGCGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCATCGGCTTC 1225 ||||||||| |||| | |||||||||||| | ||| | | | | ||| | |||||| Sbjct 24595 GGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGTAGGCTTC 24654 Query 1226 AAGTTCAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGACCGGCCGC 1285 ||||||||||||||||||||| | || ||||| || || || |||| |||| | || Sbjct 24655 AAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCCG 24714 Query 1286 GTGCGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCGCCAACTCGAACGG 1345 || ||||| | ||| | |||| | ||||| || || ||| | || | | Sbjct 24715 GTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGCG 24774 Query 1346 AAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGCAGTACGGC 1405 |||||| || ||| | || |||||| ||||||||||| | || ||| Sbjct 24775 AAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGGC 24834 Query 1406 CTGTC-CGTGGC--CGCCAT-GGCACAGACCCTCACCCGCTCCATGGGCGTGGAGCGCGT 1461 ||| | || | |||| | ||| | |||| ||||| || ||||| ||||| Sbjct 24835 CTGCAGCATGACGTCGCCCTCGGCGCG----CTCAAGCGCTCGATCGGCGTCGAGCGGCA 24890 Query 1462 CGAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACCGTGCTCGAAACCCGCCG 1521 ||| ||| ||| | | || || | | |||||||| ||| || | ||| Sbjct 24891 GGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCG 24950 Query 1522 CATGGA--AAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCCTTCAGCACCCAGTAC 1579 |||| ||| | | | ||| | ||| | ||||| |||||| ||||||| ||| ||| Sbjct 24951 GCTGGACGAAGGATCGG--TCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTAC 25008 Query 1580 GAGTACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAACGCGCACTTCTTCGAG 1639 |||||| |||||| |||| ||||||||||||||| ||||| ||| ||| ||||||| | Sbjct 25009 GAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCG 25068 Query 1640 CAGATGGACTATCTGATCCCGGAACTGCTGCGCGTGACCATCCCCGGG-CGTCTGGCCTG 1698 |||||||| |||||| ||| | ||||| || | | | | ||||| || || ||||| Sbjct 25069 CAGATGGATCATCTGACGCCGAACCTGCTCCGTGCG-CTGGCGCCGGGCCGGCTCGCCTG 25127 Query 1699 CATCCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGGCTTCCAGACCGT 1758 ||||||||||||||| || ||| | ||| | | |||||||| || | | |||||| Sbjct 25128 CATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGT 25187 Query 1759 CTACCCCTTCCACATGGAAGTGACTCGAGC-CTTCGTCAAGCATGGCTGGGCCTATATGG 1817 | | || |||||| ||||| |||||| || | || |||| | |||| Sbjct 25188 CAATCCGTTCCAC-GCCAAGTGCATCGAGCACTATATGCGCCACGGCTTCCAGTTCATGG 25246 Query 1818 GCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCTACCGCCTTTCGT 1877 |||||| ||| ||||||||||||| || ||||||||| ||||||||||||||| |||| Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTGTCGT 25306 Query 1878 GGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCGAGTACTTGCTGA 1937 | ||| | ||||||||||| |||||||| ||||| ||||| ||| ||||| Sbjct 25307 ACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGC 25366 Query 1938 TCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGGCGACGTGCCGGTGGTCAAGG 1997 | | |||||||||| | |||| ||| || || | |||| |||||| ||||| Sbjct 25367 TGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCAAGG 25426 Score = 149 bits (164), Expect = 2e-31 Identities = 316/473 (67%), Gaps = 38/473 (8%) Strand=Plus/Plus Query 377 ATCTACCTGACCAATTACGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGG-TTCAG 435 |||| ||||||||||||||||| |||||||||||||||| ||||| || | |||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACG-TCACAACCTTCAC 22842 Query 436 CGTGGCAAGCCTGGACGAAGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCG 495 || | ||||||||||| || || ||| ||| ||||| | || ||||| |||| Sbjct 22843 CGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGG-GTCA--AAGACCTTCCA 22899 Query 496 CGAGTTCATGGCTCTGTTCGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGT 555 |||| || ||||| || || |||| || ||| Sbjct 22900 -------------------------GACGTTCCTGCCGCT---ATTCGAGGCGGTGCCGT 22931 Query 556 CCGGTACCGGTACGTGGCCACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGC 615 |||| | || || || ||||| || || ||| |||| ||||| | Sbjct 22932 -----ACCGATTTGTCGCGACCGCCACCCCCTCGCCCAACCGCTACAAGGAGCTGATCCA 22986 Query 616 TTACTCGGCCTTCCTCGGCGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACG 675 |||| | | ||||||||||||||||| |||||| || ||| | |||||| | || Sbjct 22987 TTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAAGCGCTCACCCGCTTCTTCCAGCG 23046 Query 676 CAACTCTGAGAAGGCCGACCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGAT 735 |||| |||||||| | | | |||||| || | | ||||| || ||||||||| | Sbjct 23047 CAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCGCACAAGGAACAAGAGTTCTGGCT 23106 Query 736 GTGGGTGGCGTCCTGGGCGATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGA 795 |||| || |||||| | ||| | |||||||| ||||||||||| ||||| ||||| Sbjct 23107 GTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCGAGCGACCTCGGATTCAGTGACGA 23166 Query 796 AGGCTACGCGCTACCGGAACTGGACATCCGCTGGCACGAAGTACCGTCCGACC 848 ||||||| || || | || | | ||||||||||| || | ||| |||| Sbjct 23167 CGGCTACGATCTGCCCGCGCTCACCGTGCGCTGGCACGAGGTCCAGTCTGACC 23219 Score = 123 bits (136), Expect = 8e-24 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 2315 CACCCGGACGTATGGACCGACGTCGCCCGCATGCGGACGCTCAACGCCCAGCAGTACAGC 2374 || || ||||| ||| |||| ||| || |||| ||||||||||| | ||||| | || Sbjct 25817 CATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGTCCGC 25876 Query 2375 AAGGGCCAGGAAATGCACCTGTGCCCGCTGCAGTTCGACATCGTCGACCGGGCCATCGTG 2434 |||||| || | |||| | ||||| || ||||||||||||||||||||| |||| | Sbjct 25877 AAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAG 25936 Query 2435 CAGTACTCCATGGAAGGAGACCTGGTCTTCGATCCCTTCGGCGGGATCATGACCGTCCCG 2494 | ||||| ||| || || ||||| |||||||| ||| |||| || ||||| ||| Sbjct 25937 CGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCG 25996 Query 2495 TACTGCGCGC 2504 ||||||| Sbjct 25997 --ATGCGCGC 26004 >seq828 Length=10702 Score = 161 bits (178), Expect = 3e-35 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046 ||| || || ||||| |||||||| ||| ||||||||| | | || || |||| || Sbjct 1556 GCCATTCCGCTGCTTGCTGATGATCACCTCGGCCACGCCGGGCTCCTTGGAGTCCTTGTT 1615 Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106 ||| ||||| ||||| | ||||||||| |||||||||||||||||||| || || || Sbjct 1616 GTAGTAGTCGTCGCGGTAGATGAACATGATGACGTCGGCGTCCTGCTCGATGGCGCCCGA 1675 Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166 ||||||||||| ||||||||| ||||||| | ||| ||||| | ||| || Sbjct 1676 TTCGCGCAGGTCGCTCATCATCGGGCGCTTGTCGGTGCGCGACTCCACGCCGCGTGACAG 1735 Query 34167 CTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 |||||||||| ||||||| ||| || || ||| ||||||| Sbjct 1736 CTGCGACAGCGCGATCACCGGGCAGCCCAGTTCCTTGGCCAG 1777 >seq1459 Length=17170 Score = 127 bits (140), Expect = 7e-25 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113 || || ||| |||||||| || || |||||||||||||||||||| ||||| ||||| Sbjct 10904 TCTTCGCGGAACACGAACCAGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCGCGA 10845 Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173 ||||| |||| | ||| ||||||| | |||||||||| | ||| ||||||||||| Sbjct 10844 AGGTCGGACAGCTGCGGGCGCTTGTCCTCGCGCTGCTCCACCGCACGGCTGAGCTGCGAC 10785 Query 34174 AGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 ||| ||| |||||||| || ||| ||||||| Sbjct 10784 AGCGCGAGCACGGGGACGTGCAGATCCTTGGCCAG 10750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160458809390760