Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_030909.1
Length=50183
Score E
Sequences producing significant alignments: (Bits) Value
seq559 313 8e-81
seq828 161 3e-35
seq1459 127 7e-25
>seq559
Length=35318
Score = 313 bits (346), Expect = 8e-81
Identities = 580/840 (69%), Gaps = 16/840 (2%)
Strand=Plus/Plus
Query 1166 GGCAGCGGCTGCAACTTCCAGCGCCACTGCTCGTGGGCCATCTACCTGGGCATCGGCTTC 1225
||||||||| |||| | |||||||||||| | ||| | | | | ||| | ||||||
Sbjct 24595 GGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGTAGGCTTC 24654
Query 1226 AAGTTCAACGACTTCATCCAGTCCATTCACCGCCTGCACCGATTCCTGCAGACCGGCCGC 1285
||||||||||||||||||||| | || ||||| || || || |||| |||| | ||
Sbjct 24655 AAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACCCG 24714
Query 1286 GTGCGCATCGACCTGATCTATACCGAGGCCGAGCGCGACATCCGCCGCCAACTCGAACGG 1345
|| ||||| | ||| | |||| | ||||| || || ||| | || | |
Sbjct 24715 GTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGGCG 24774
Query 1346 AAGTGGCAGCAGCACAACACCATGGTTCAGCGCATGACCGAGATCATCAAGCAGTACGGC 1405
|||||| || ||| | || |||||| ||||||||||| | || |||
Sbjct 24775 AAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATGGC 24834
Query 1406 CTGTC-CGTGGC--CGCCAT-GGCACAGACCCTCACCCGCTCCATGGGCGTGGAGCGCGT 1461
||| | || | |||| | ||| | |||| ||||| || ||||| |||||
Sbjct 24835 CTGCAGCATGACGTCGCCCTCGGCGCG----CTCAAGCGCTCGATCGGCGTCGAGCGGCA 24890
Query 1462 CGAGATCAAGGGCAAGGACTACACCATCGTCAACAACGACACCGTGCTCGAAACCCGCCG 1521
||| ||| ||| | | || || | | |||||||| ||| || | |||
Sbjct 24891 GGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCG 24950
Query 1522 CATGGA--AAGCAACAGCGTCGGCTTGACCATCACCAGCATCCCCTTCAGCACCCAGTAC 1579
|||| ||| | | | ||| | ||| | ||||| |||||| ||||||| ||| |||
Sbjct 24951 GCTGGACGAAGGATCGG--TCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTAC 25008
Query 1580 GAGTACTCGCCGAACTACGCCGACTTCGGCCACACCGACGACAACGCGCACTTCTTCGAG 1639
|||||| |||||| |||| ||||||||||||||| ||||| ||| ||| ||||||| |
Sbjct 25009 GAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCG 25068
Query 1640 CAGATGGACTATCTGATCCCGGAACTGCTGCGCGTGACCATCCCCGGG-CGTCTGGCCTG 1698
|||||||| |||||| ||| | ||||| || | | | | ||||| || || |||||
Sbjct 25069 CAGATGGATCATCTGACGCCGAACCTGCTCCGTGCG-CTGGCGCCGGGCCGGCTCGCCTG 25127
Query 1699 CATCCACGTGAAGGATCGCATCATTCCCGGCGGAATGACCGGCCTTGGCTTCCAGACCGT 1758
||||||||||||||| || ||| | ||| | | |||||||| || | | ||||||
Sbjct 25128 CATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGT 25187
Query 1759 CTACCCCTTCCACATGGAAGTGACTCGAGC-CTTCGTCAAGCATGGCTGGGCCTATATGG 1817
| | || |||||| ||||| |||||| || | || |||| | ||||
Sbjct 25188 CAATCCGTTCCAC-GCCAAGTGCATCGAGCACTATATGCGCCACGGCTTCCAGTTCATGG 25246
Query 1818 GCATGAAGACCATCGTCACCGACGTGGTTCGCGAGAACGCCCAGACCTACCGCCTTTCGT 1877
|||||| ||| ||||||||||||| || ||||||||| ||||||||||||||| ||||
Sbjct 25247 GCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTGTCGT 25306
Query 1878 GGACGGAGCAGTGCAAGGACGGCACCAAGATGGGTGTCGGCATGCCCGAGTACTTGCTGA 1937
| ||| | ||||||||||| |||||||| ||||| ||||| ||| |||||
Sbjct 25307 ACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGTGCTGC 25366
Query 1938 TCTTCCGCAAGCCGCCCACCGACAACTCCAACGCCTACGGCGACGTGCCGGTGGTCAAGG 1997
| | |||||||||| | |||| ||| || || | |||| |||||| |||||
Sbjct 25367 TGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCACCAAGG 25426
Score = 149 bits (164), Expect = 2e-31
Identities = 316/473 (67%), Gaps = 38/473 (8%)
Strand=Plus/Plus
Query 377 ATCTACCTGACCAATTACGAGACCGTCCGCGACGGCAAGCTCGACCCTCGCCGG-TTCAG 435
|||| ||||||||||||||||| |||||||||||||||| ||||| || | ||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACG-TCACAACCTTCAC 22842
Query 436 CGTGGCAAGCCTGGACGAAGCCAGTTGCCTTCGCGGCTTCGGCGGCAGCAAGACGTTCCG 495
|| | ||||||||||| || || ||| ||| ||||| | || ||||| ||||
Sbjct 22843 CGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGG-GTCA--AAGACCTTCCA 22899
Query 496 CGAGTTCATGGCTCTGTTCGCTGGTGACGATCGCGCCGCCGGCATCCGCGGCGATGGCGT 555
|||| || ||||| || || |||| || |||
Sbjct 22900 -------------------------GACGTTCCTGCCGCT---ATTCGAGGCGGTGCCGT 22931
Query 556 CCGGTACCGGTACGTGGCCACTGCCACGCCAAGCCCGAACGAATACATCGAGCTACTGGC 615
|||| | || || || ||||| || || ||| |||| ||||| |
Sbjct 22932 -----ACCGATTTGTCGCGACCGCCACCCCCTCGCCCAACCGCTACAAGGAGCTGATCCA 22986
Query 616 TTACTCGGCCTTCCTCGGCGTGATGGATGTCGGCCAGGCCAAGACCAGGTTCTTCAAACG 675
|||| | | ||||||||||||||||| |||||| || ||| | |||||| | ||
Sbjct 22987 TTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAAGCGCTCACCCGCTTCTTCCAGCG 23046
Query 676 CAACTCTGAGAAGGCCGACCAACTCACCATCCATGCCCACAAAGAGGGCGAGTTCTGGAT 735
|||| |||||||| | | | |||||| || | | ||||| || ||||||||| |
Sbjct 23047 CAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCGCACAAGGAACAAGAGTTCTGGCT 23106
Query 736 GTGGGTGGCGTCCTGGGCGATCTTCGTTCAGCGCCCCAGCGACCTCGGGTTCAGCGACGA 795
|||| || |||||| | ||| | |||||||| ||||||||||| ||||| |||||
Sbjct 23107 GTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCGAGCGACCTCGGATTCAGTGACGA 23166
Query 796 AGGCTACGCGCTACCGGAACTGGACATCCGCTGGCACGAAGTACCGTCCGACC 848
||||||| || || | || | | ||||||||||| || | ||| ||||
Sbjct 23167 CGGCTACGATCTGCCCGCGCTCACCGTGCGCTGGCACGAGGTCCAGTCTGACC 23219
Score = 123 bits (136), Expect = 8e-24
Identities = 142/190 (75%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 2315 CACCCGGACGTATGGACCGACGTCGCCCGCATGCGGACGCTCAACGCCCAGCAGTACAGC 2374
|| || ||||| ||| |||| ||| || |||| ||||||||||| | ||||| | ||
Sbjct 25817 CATCCCGACGTGTGGGACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGTCCGC 25876
Query 2375 AAGGGCCAGGAAATGCACCTGTGCCCGCTGCAGTTCGACATCGTCGACCGGGCCATCGTG 2434
|||||| || | |||| | ||||| || ||||||||||||||||||||| |||| |
Sbjct 25877 AAGGGCGCCGAGAAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAG 25936
Query 2435 CAGTACTCCATGGAAGGAGACCTGGTCTTCGATCCCTTCGGCGGGATCATGACCGTCCCG 2494
| ||||| ||| || || ||||| |||||||| ||| |||| || ||||| |||
Sbjct 25937 CGATACTCTATGCGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCG 25996
Query 2495 TACTGCGCGC 2504
|||||||
Sbjct 25997 --ATGCGCGC 26004
>seq828
Length=10702
Score = 161 bits (178), Expect = 3e-35
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGTGTCCGGGTG 34046
||| || || ||||| |||||||| ||| ||||||||| | | || || |||| ||
Sbjct 1556 GCCATTCCGCTGCTTGCTGATGATCACCTCGGCCACGCCGGGCTCCTTGGAGTCCTTGTT 1615
Query 34047 ATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGA 34106
||| ||||| ||||| | ||||||||| |||||||||||||||||||| || || ||
Sbjct 1616 GTAGTAGTCGTCGCGGTAGATGAACATGATGACGTCGGCGTCCTGCTCGATGGCGCCCGA 1675
Query 34107 CTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAG 34166
||||||||||| ||||||||| ||||||| | ||| ||||| | ||| ||
Sbjct 1676 TTCGCGCAGGTCGCTCATCATCGGGCGCTTGTCGGTGCGCGACTCCACGCCGCGTGACAG 1735
Query 34167 CTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208
|||||||||| ||||||| ||| || || ||| |||||||
Sbjct 1736 CTGCGACAGCGCGATCACCGGGCAGCCCAGTTCCTTGGCCAG 1777
>seq1459
Length=17170
Score = 127 bits (140), Expect = 7e-25
Identities = 121/155 (78%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 34054 TCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGC 34113
|| || ||| |||||||| || || |||||||||||||||||||| ||||| |||||
Sbjct 10904 TCTTCGCGGAACACGAACCAGACCATGTCGGCGTCCTGCTCGATCGAGCCGGATTCGCGA 10845
Query 34114 AGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGAC 34173
||||| |||| | ||| ||||||| | |||||||||| | ||| |||||||||||
Sbjct 10844 AGGTCGGACAGCTGCGGGCGCTTGTCCTCGCGCTGCTCCACCGCACGGCTGAGCTGCGAC 10785
Query 34174 AGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208
||| ||| |||||||| || ||| |||||||
Sbjct 10784 AGCGCGAGCACGGGGACGTGCAGATCCTTGGCCAG 10750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160458809390760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |