Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_030943.1
Length=54990
Score E
Sequences producing significant alignments: (Bits) Value
seq535 87.8 6e-13
>seq535
Length=9462
Score = 87.8 bits (96), Expect = 6e-13
Identities = 154/218 (71%), Gaps = 15/218 (7%)
Strand=Plus/Minus
Query 3605 CGGATCAACTCTCCCGGCGGCGACGTCTACGACGCGATCGCCATCACCAACGC----GCT 3660
||||||||||| ||||||||| ||||| || | | || ||| |||||| ||
Sbjct 8147 CGGATCAACTCGCCCGGCGGCTACGTCATGGAAGGTCTGGCGATCTTCAACGCCTTTGCG 8088
Query 3661 GCG-CAACCACGACGCGACGA----TCACCGTCCAGGTCGACGGCCTCGCCGCGTCGGCG 3715
||| | | || || | ||| ||||| | || |||||||||||||||| || |
Sbjct 8087 GCGGCGAAGGCGGCGGGCCGAAAGGTCACCATTCACATCGACGGCCTCGCCGCTTCCATG 8028
Query 3716 GCGAGCTTCATCGCGATGGCCGGCGACGAGGTGGTGATGTGCCG-CAACACCGAGATGAT 3774
||| | ||||||| ||||| ||||||||| | | ||| |||| |||| || ||||||
Sbjct 8027 GCGTCCGTCATCGCCATGGCAGGCGACGAGATCATCATG-GCCGACAACGCCCTGATGAT 7969
Query 3775 GATCCACGACGCCCGCGGATTCTG--CATCGGCAACGC 3810
||| ||| | ||| || | || ||||||| ||||
Sbjct 7968 GATTCACAA--TCCGTGGGATGTGGCCATCGGCGACGC 7933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175840711808576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |