Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 170 3e-37
seq1636 147 3e-30
seq2557 87.8 3e-12
>seq2071
Length=31734
Score = 170 bits (188), Expect = 3e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602
|||| ||||| ||||| |||||||||||| | ||||||| |||||||||||| |||
Sbjct 12055 AAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGAC 11996
Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662
|||| ||| |||||||| ||||||||||| || ||||| ||||| || ||||| |||
Sbjct 11995 CTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCAC 11936
Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722
|||||||||||||||||| | || | | ||| || | ||| ||| ||| ||
Sbjct 11935 GAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTG 11876
Query 202723 ACTATCTGGGACGAATGGGCGCGGGATGA 202751
|| |||||||||||||||||||| || ||
Sbjct 11875 ACCATCTGGGACGAATGGGCGCGCGAGGA 11847
Score = 131 bits (144), Expect = 3e-25
Identities = 195/272 (72%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349
|| ||||| ||| |||| |||||||| ||||| ||||| | ||||||||||| ||||||
Sbjct 11632 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 11573
Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409
||| || || |||| || | ||| | || |||||| | || ||| || || ||
Sbjct 11572 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGAC 11513
Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467
||| ||||||| ||||| || |||||| || |||||| | ||||||| |
Sbjct 11512 TTCATCTGGACCGGCGGCGACTGCCACATC--TACAGCAACCACCACGAGCAGGTGGAAC 11455
Query 203468 TGCAGTTAACTCGTGACCCGCACCCATTACCGCGT-CTGAAATTCAAACGTAAGCCCGAG 203526
||||| | | || | || || || |||| ||| ||| | |||| || ||||| | |
Sbjct 11454 TGCAGCTCTCCCGCCAGCCCCATCC-CTACCCCGTGCTGGACATCAAGCGCAAGCCGGCG 11396
Query 203527 TCTATCTTCGACTACCAGTTCGAAGACTTTGA 203558
|| ||||||||||||| || ||| ||||| ||
Sbjct 11395 TCGATCTTCGACTACCGGTACGAGGACTTCGA 11364
>seq1636
Length=1555
Score = 147 bits (162), Expect = 3e-30
Identities = 186/253 (74%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 202492 ATGCGCCAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCAT-GAAAAGAAAGA 202550
|||||||| |||||| | || |||| ||| ||| || ||| || || ||| ||
Sbjct 556 ATGCGCCAATATCTCGACCTCATGGCCCGCGTGCTCGAAT-CGGGCAGCGAGCAGATGGA 614
Query 202551 CCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGA 202610
||| |||||||| ||||||| | | | ||||| |||||||||||| || ||| ||||
Sbjct 615 CCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCCGA 674
Query 202611 AGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCT 202670
|||||||| || | ||||| || || | ||||| || || ||||| |||| ||||
Sbjct 675 GGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGCT 734
Query 202671 GTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATCTG 202730
|||||||||| || ||||||||| | | | ||| | ||| | ||||| |||||
Sbjct 735 GTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCTG 794
Query 202731 GGACGAATGGGCG 202743
|||||||||||||
Sbjct 795 GGACGAATGGGCG 807
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 203305 TATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCGTATGCTTTA 203364
|| |||||| ||||| ||||| | ||||||||||| ||||||||| ||||| |
Sbjct 1045 TACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTG 1104
Query 203365 CTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTCTGGACAGGC 203424
|| || | ||| | || ||||| | ||| | | | |||||| ||||||| |||
Sbjct 1105 CTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCATCTGGACCGGC 1164
Query 203425 GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCG 203465
|| ||| || || ||||||||||| || || ||||| ||
Sbjct 1165 GGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCG 1205
>seq2557
Length=8265
Score = 87.8 bits (96), Expect = 3e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769
|||||||||| |||||||| |||| ||||||||| |||||||||||||||||| ||||
Sbjct 489 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 430
Query 2770 TCAGTCCTGCCAT 2782
||| || |||||
Sbjct 429 TCACTCGCGCCAT 417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788293157704000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |