Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq2071 170 3e-37 seq1636 147 3e-30 seq2557 87.8 3e-12 >seq2071 Length=31734 Score = 170 bits (188), Expect = 3e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 |||| ||||| ||||| |||||||||||| | ||||||| |||||||||||| ||| Sbjct 12055 AAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGAC 11996 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 |||| ||| |||||||| ||||||||||| || ||||| ||||| || ||||| ||| Sbjct 11995 CTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCAC 11936 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722 |||||||||||||||||| | || | | ||| || | ||| ||| ||| || Sbjct 11935 GAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTG 11876 Query 202723 ACTATCTGGGACGAATGGGCGCGGGATGA 202751 || |||||||||||||||||||| || || Sbjct 11875 ACCATCTGGGACGAATGGGCGCGCGAGGA 11847 Score = 131 bits (144), Expect = 3e-25 Identities = 195/272 (72%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 203290 CTATCGTGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATC 203349 || ||||| ||| |||| |||||||| ||||| ||||| | ||||||||||| |||||| Sbjct 11632 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 11573 Query 203350 GCCTCGTATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAG 203409 ||| || || |||| || | ||| | || |||||| | || ||| || || || Sbjct 11572 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGAC 11513 Query 203410 TTCGTCTGGACAGGCGGTGA--TACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTC 203467 ||| ||||||| ||||| || |||||| || |||||| | ||||||| | Sbjct 11512 TTCATCTGGACCGGCGGCGACTGCCACATC--TACAGCAACCACCACGAGCAGGTGGAAC 11455 Query 203468 TGCAGTTAACTCGTGACCCGCACCCATTACCGCGT-CTGAAATTCAAACGTAAGCCCGAG 203526 ||||| | | || | || || || |||| ||| ||| | |||| || ||||| | | Sbjct 11454 TGCAGCTCTCCCGCCAGCCCCATCC-CTACCCCGTGCTGGACATCAAGCGCAAGCCGGCG 11396 Query 203527 TCTATCTTCGACTACCAGTTCGAAGACTTTGA 203558 || ||||||||||||| || ||| ||||| || Sbjct 11395 TCGATCTTCGACTACCGGTACGAGGACTTCGA 11364 >seq1636 Length=1555 Score = 147 bits (162), Expect = 3e-30 Identities = 186/253 (74%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 202492 ATGCGCCAGTATCTCCAACTGATGGAATCCGTCCTCTCATTCGGTCAT-GAAAAGAAAGA 202550 |||||||| |||||| | || |||| ||| ||| || ||| || || ||| || Sbjct 556 ATGCGCCAATATCTCGACCTCATGGCCCGCGTGCTCGAAT-CGGGCAGCGAGCAGATGGA 614 Query 202551 CCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACCGA 202610 ||| |||||||| ||||||| | | | ||||| |||||||||||| || ||| |||| Sbjct 615 CCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCCGA 674 Query 202611 AGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTGCT 202670 |||||||| || | ||||| || || | ||||| || || ||||| |||| |||| Sbjct 675 GGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGCT 734 Query 202671 GTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATCTG 202730 |||||||||| || ||||||||| | | | ||| | ||| | ||||| ||||| Sbjct 735 GTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCTG 794 Query 202731 GGACGAATGGGCG 202743 ||||||||||||| Sbjct 795 GGACGAATGGGCG 807 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 203305 TATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCGTATGCTTTA 203364 || |||||| ||||| ||||| | ||||||||||| ||||||||| ||||| | Sbjct 1045 TACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCCAGCTATGCGCTG 1104 Query 203365 CTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTCTGGACAGGC 203424 || || | ||| | || ||||| | ||| | | | |||||| ||||||| ||| Sbjct 1105 CTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGAGTTCATCTGGACCGGC 1164 Query 203425 GGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCG 203465 || ||| || || ||||||||||| || || ||||| || Sbjct 1165 GGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGCG 1205 >seq2557 Length=8265 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2710 TGTAGCTCAGACGGTTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAAACCCG 2769 |||||||||| |||||||| |||| ||||||||| |||||||||||||||||| |||| Sbjct 489 TGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 430 Query 2770 TCAGTCCTGCCAT 2782 ||| || ||||| Sbjct 429 TCACTCGCGCCAT 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788293157704000