Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2528 244 1e-59 seq2704 93.3 6e-14 >seq2528 Length=594046 Score = 244 bits (270), Expect = 1e-59 Identities = 599/903 (66%), Gaps = 20/903 (2%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| || || || |||||||| |||| || || ||||| || || | ||| | | Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 || || || | | || ||| || |||||||| | ||| || |||| ||||||| ||| Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTA---AGATCGAGAAACTCC 78101 ||||| || | ||| ||| || ||||| | |||||| ||||| | ||| || Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276 Query 78102 ATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCT 78161 | ||||| || ||||| ||||| ||||| || || | | || ||||||||||| || Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216 Query 78162 CCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTA 78221 ||||| || | ||| | || ||||| || | || | | ||| || || || |||||| Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156 Query 78222 GATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA----TTACTAATGGA 78277 || | ||||||||||| | ||| || ||| | || || ||| ||| || | Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 | || || || || || |||| || || || || || ||| | ||||||||||| Sbjct 61097 GA--CCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040 Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 78397 ||| || ||||| || ||| |||||| | || |||||| | |||||| | || Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980 Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| || || || | || ||||| || || || || |||||| || | | ||| Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||| |||||||| || || |||||| ||||| || ||||| || ||||| | Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 ||| ||||| || | || | ||| ||| || ||||| || || || | Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 || || || |||||||| | ||| ||| || | ||||||| |||| | || || || Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740 Query 78638 TTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT---GAAATAATAGGAGATCG 78694 | || || || ||||||| || | ||| || || || ||||| | | | Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTC---GTAAGTTTTTTGAGAGATCATAGGTGCTGG 60683 Query 78695 TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGttt 78754 || || || || || || | | | | ||| || || || | ||| |||| Sbjct 60682 GCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTT 60623 Query 78755 ttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGG 78814 ||| || | ||| || || || ||||| |||||||| || || || || ||||| || || Sbjct 60622 TTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGG 60563 Query 78815 ATG 78817 ||| Sbjct 60562 ATG 60560 >seq2704 Length=633058 Score = 93.3 bits (102), Expect = 6e-14 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| ||||| || ||||| || || || || |||| ||||| | ||| Sbjct 56803 TCGGAGTGAATGTTTTCCATCATGATCTGGAAGCCATAGAAGCATCGGGCTTCCGGGATT 56862 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || || || ||||| | | |||||||| || || ||||| |||||| Sbjct 56863 TGGACTTCACCACTGAAGCGTTCGACAAGGTTCTCATTGACAATACCATCGGAAGCAGCG 56922 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614 || || || || || | || || || ||| | | | ||||| | |||||| Sbjct 56923 AAGAAGGCCAAGACGCGAGAGATGAAGTAGCGTTCATCGTCATTCAGTCGGTGGTTCCAG 56982 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | | ||| || || | || | ||||| || ||||| || |||||||||||||| Sbjct 56983 TCGTGAAGATCCTTCGACAGGTCGATCTCTTCGGCAGTCCAGAAGGATGCCTCTGCTTTC 57042 Query 48675 TTATACATATTCCATAT 48691 || ||||| | ||| || Sbjct 57043 TTGTACATTTGCCAGAT 57059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694645146527360