Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2528 244 1e-59
seq2704 93.3 6e-14
>seq2528
Length=594046
Score = 244 bits (270), Expect = 1e-59
Identities = 599/903 (66%), Gaps = 20/903 (2%)
Strand=Plus/Minus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||| || || || |||||||| |||| || || ||||| || || | ||| | |
Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|| || || | | || ||| || |||||||| | ||| || |||| ||||||| |||
Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTA---AGATCGAGAAACTCC 78101
||||| || | ||| ||| || ||||| | |||||| ||||| | ||| ||
Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276
Query 78102 ATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCT 78161
| ||||| || ||||| ||||| ||||| || || | | || ||||||||||| ||
Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216
Query 78162 CCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTA 78221
||||| || | ||| | || ||||| || | || | | ||| || || || ||||||
Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156
Query 78222 GATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA----TTACTAATGGA 78277
|| | ||||||||||| | ||| || ||| | || || ||| ||| || |
Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC--ATTAA 61098
Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337
| || || || || || |||| || || || || || ||| | |||||||||||
Sbjct 61097 GA--CCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040
Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 78397
||| || ||||| || ||| |||||| | || |||||| | |||||| | ||
Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
|||||| || || || | || ||||| || || || || |||||| || | | |||
Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
||| |||||||| || || |||||| ||||| || ||||| || ||||| |
Sbjct 60919 GTAAGTTTCAATCGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATAAT 60860
Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577
||| ||||| || | || | ||| ||| || ||||| || || || |
Sbjct 60859 CATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCTAG 60800
Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637
|| || || |||||||| | ||| ||| || | ||||||| |||| | || || ||
Sbjct 60799 TGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTAAG 60740
Query 78638 TTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT---GAAATAATAGGAGATCG 78694
| || || || ||||||| || | ||| || || || ||||| | | |
Sbjct 60739 CTCGTCAGCGTGCTTCATAACAATTTC---GTAAGTTTTTTGAGAGATCATAGGTGCTGG 60683
Query 78695 TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGttt 78754
|| || || || || || | | | | ||| || || || | ||| ||||
Sbjct 60682 GCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGTTT 60623
Query 78755 ttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGG 78814
||| || | ||| || || || ||||| |||||||| || || || || ||||| || ||
Sbjct 60622 TTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCTGG 60563
Query 78815 ATG 78817
|||
Sbjct 60562 ATG 60560
>seq2704
Length=633058
Score = 93.3 bits (102), Expect = 6e-14
Identities = 175/257 (68%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
||||||||||| ||||| || ||||| || || || || |||| ||||| | |||
Sbjct 56803 TCGGAGTGAATGTTTTCCATCATGATCTGGAAGCCATAGAAGCATCGGGCTTCCGGGATT 56862
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| || || || || ||||| | | |||||||| || || ||||| ||||||
Sbjct 56863 TGGACTTCACCACTGAAGCGTTCGACAAGGTTCTCATTGACAATACCATCGGAAGCAGCG 56922
Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAG 48614
|| || || || || | || || || ||| | | | ||||| | ||||||
Sbjct 56923 AAGAAGGCCAAGACGCGAGAGATGAAGTAGCGTTCATCGTCATTCAGTCGGTGGTTCCAG 56982
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
|| | | ||| || || | || | ||||| || ||||| || ||||||||||||||
Sbjct 56983 TCGTGAAGATCCTTCGACAGGTCGATCTCTTCGGCAGTCCAGAAGGATGCCTCTGCTTTC 57042
Query 48675 TTATACATATTCCATAT 48691
|| ||||| | ||| ||
Sbjct 57043 TTGTACATTTGCCAGAT 57059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694645146527360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |