Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2528 269 4e-67 seq2704 102 1e-16 >seq2528 Length=594046 Score = 269 bits (298), Expect = 4e-67 Identities = 607/905 (67%), Gaps = 24/905 (3%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || |||||||| |||| || || ||||| ||||| | ||| | | Sbjct 61452 TCAAACTCGTCGCCGTAAACATCAGCCAACCCTGGTGCCTCATTGGGACAGAACAAGGTC 61393 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | || |||||| |||||||| | ||| || |||| ||||||| ||| Sbjct 61392 CAATCGCCGTTCTTCTCAACCCGCTTCATAAACAAATCTGGGGTCCAGAGAGCAAGAAAG 61333 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA---AGATCTAGGAACTCC 76696 ||||| || | ||| ||| || ||||| | |||||| ||||| | || || Sbjct 61332 AGATCACGAGCTCTCACTTCCTCTTTTCCG---TGGTTTTTACGGAGATCCAAAAATTCG 61276 Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756 | ||||| || ||||| ||||| ||||| || || | |||| ||||||||||| || Sbjct 61275 AAGATATCGGAGTGCCAGGGTTCAAGATAGATGGCGAAGGCACCTGGTCGTTTATTGCCA 61216 Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816 ||||| || | ||| | |||||||| || | || | | ||| || || || |||||| Sbjct 61215 CCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACACGGAGCATGGGGATGATTCCGTTA 61156 Query 76817 GATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA----TTACTAATAGA 76872 || | ||||||||||| | ||| || ||| ||||| ||| ||| | || Sbjct 61155 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTGGCACGGATACGGTGTAC-ATTA-- 61099 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 || || || || || || | || || || || |||||| ||| | || || ||||| Sbjct 61098 -AGACCAATACCACCAGCTGTCTTGGAAATCAGTGCACAGGTTTTGAGCGTATCGTAGAT 61040 Query 76933 GCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 76992 || || |||||||| ||| |||||| | || |||||| | |||||| | || Sbjct 61039 ACCTTCGATACTATCCTCCTTCATGTCGATGAGGAAACAGGATGCCATTTGTGGCTGTGG 60980 Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| || || || | || ||||| || |||||||| |||||| || | | ||| Sbjct 60979 AGTTCCCGCGTTGAAAAGAGTGGGAGAAGCGTGAGTGAAGAATTTTTGGGACATCAAATT 60920 Query 77053 GTATGTTTCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATC 77110 ||| |||||||| | ||||| || ||| ||||| || || || || ||||| Sbjct 60919 GTAAGTTTCAAT--CGCCTTCTCAATGTCCTCGCCGTGAATACCAACCGCAACCCGCATA 60862 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCC 77170 | ||| ||||| || || || || ||| ||| || ||||| || || || Sbjct 60861 ATCATGTGCTGCGGACGCTCGGCAACCTTGCCATTGATCCGCAACAGATAAGACCGCTCT 60802 Query 77171 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTT 77230 | || || || |||||||| | ||| ||| || | ||||||| |||| |||| || Sbjct 60801 AGTGTCTTGAAGCCAAAATATTGGTAGTTAAAATCACGATCGTAAACAATAGCCGAGTTA 60742 Query 77231 AGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT---AGAAATAATTGGAGAT 77287 || | ||| | || ||||||| || | ||| | ||| || || || | | Sbjct 60741 AGCTCGTCAGCGTGCTTCATAACAATTTC---GTAAGTTTTTTGAGAGATCATAGGTGCT 60685 Query 77288 CGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGt 77347 | || || || || || || | | | | || || || || ||| || Sbjct 60684 GGGCGGTTGTTCTTTGGGTTGACGTAATGATAGAGATCGTCAATGACCGAAGAGAATTGT 60625 Query 77348 ttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 ||||| || | ||| || || || |||||||||||||| || || || ||||||||||| Sbjct 60624 TTTTTCGTCTGCTTATGCAGGTTGGATACGGCTATTCTGGCGGCAAGGATTGCATAGTCT 60565 Query 77408 GGATG 77412 ||||| Sbjct 60564 GGATG 60560 >seq2704 Length=633058 Score = 102 bits (112), Expect = 1e-16 Identities = 201/294 (68%), Gaps = 5/294 (2%) Strand=Plus/Plus Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950 || || | ||||||||| || | || || | || || ||||||||||| || Sbjct 56767 TCCTTGATATATGTATCAATAAGGAGGGAGTAAGTCTCGGAGTGAATGTTTTCCATCATG 56826 Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 ||||| || || || || |||| ||||| | || || || || || || ||||| Sbjct 56827 ATCTGGAAGCCATAGAAGCATCGGGCTTCCGGGATTTGGACTTCACCACTGAAGCGTTC- 56885 Query 47011 GACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069 ||||| |||||||| || || ||||| |||||| || || ||||| || | || Sbjct 56886 GACAAGGTTCTCATTGACAATACCATCGGAAGCAGCGAAGAAGGCCAAGACGCGAGAGAT 56945 Query 47070 AAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATC 47126 || || ||||||| | ||||| | |||||||| | | ||| || || | || Sbjct 56946 GAAGTAGCGTTCATCGTCATTCAGTCGGTGGTTCCAGTCGTGAAGATCCTTCGACAGGTC 57005 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | ||||| || |||||||| || ||||||||||| || ||||| | ||| || Sbjct 57006 GATCTCTTCGGCAGTCCAGAAGGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 57059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712910124583680