Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031074.1
Length=92580
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 389 2e-103
seq1636 264 7e-66
>seq2071
Length=31734
Score = 389 bits (430), Expect = 2e-103
Identities = 560/782 (72%), Gaps = 47/782 (6%)
Strand=Plus/Minus
Query 820 TGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCT 879
||||| | | ||| || |||||||| |||||||||| ||| ||||||| |||| |
Sbjct 12065 TGGCACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGAT 12006
Query 880 GCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATC 939
||||| |||||| | ||| |||||||||||||| ||||| ||| |||||| | |||||
Sbjct 12005 GCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATC 11946
Query 940 GGTTGCGTACGAACTTCTGTGGTTCCTC-AGTG-----GCGACACGAACGTGAAGGCGCT 993
| |||| || ||||||||||| || | |||||| ||| ||| ||
Sbjct 11945 CATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAAC---AAGCTGCG 11889
Query 994 CAACGACAACGGCGTCACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGG 1050
| || |||||| |||||||||||||| ||||| ||| | ||||| |||| ||
Sbjct 11888 C---GAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCG---ACCTGGG 11835
Query 1051 TCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGA- 1109
|| || ||||||| ||||||||| ||||| ||| | || || || | |
Sbjct 11834 GCCGGTGTACGGCGTGCAGTGGCGCAGCTGGC----CGACACCCGA----CGGCGGGCAC 11783
Query 1110 -TTGACCAGATCTCGGCCGCCGTGGAG--CTGCTTCGCGAGGACCCTGACTCGCGCCGGA 1166
| ||||||||| | | || ||| || | | || | | || ||||||||||| |
Sbjct 11782 ATCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCA--ATCCGGACTCGCGCCGCA 11725
Query 1167 ACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACA 1226
| | || ||| |||||||| | ||| || | ||||| || || ||||||
Sbjct 11724 TCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACG 11665
Query 1227 TCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCG 1286
| |||||| | ||||||| |||||| ||| ||| ||| | ||||||||||| |
Sbjct 11664 CGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTG 11605
Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346
| ||||| ||||| || ||||||||||| |||||| |||||||| ||| ||||||||
Sbjct 11604 CCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGA 11545
Query 1347 TCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACA 1406
||||||||||| || |||| ||| || || | |||||||||||||||||||||||||
Sbjct 11544 TCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATCTGGACCGGCGGCGACTGCCACA 11485
Query 1407 TCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACC 1466
|||||| ||||||| ||| |||| | |||||||| ||| | || | |||||||
Sbjct 11484 TCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCCATCCCTACC 11425
Query 1467 CGAGGCTCGTGCT--ACACCACGCGC-------CGTCGATCTTCGACTACCGGTACGAGC 1517
| |||||| ||| || |||| ||||||||||||||||||||||||||
Sbjct 11424 C------CGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACCGGTACGAGG 11371
Query 1518 ACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577
|| || | || || ||||| | | || ||| ||||||||||||| ||||| |||||||
Sbjct 11370 ACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGTGGCGGTCTGAT 11311
Query 1578 GG 1579
||
Sbjct 11310 GG 11309
>seq1636
Length=1555
Score = 264 bits (292), Expect = 7e-66
Identities = 433/616 (70%), Gaps = 10/616 (2%)
Strand=Plus/Plus
Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895
|| ||||||||||| |||||||| ||| |||||| |||| |||||| ||| || ||
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672
Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTG-CGTACGAACT 954
|||||||||||| || ||||||| ||| | ||| | ||| | ||| ||| |
Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGT-CGAGTT 731
Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014
||||||||||| | |||||||| |||||| ||| | || | |||| |||
Sbjct 732 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 791
Query 1015 CTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCG 1074
||||||||| ||||| || | | || | ||||| || || || ||| ||| |||||
Sbjct 792 CTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 851
Query 1075 GCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGA 1134
||||| || || | |||| | || | || ||||||||| || ||| |
Sbjct 852 CGACTGG---GT-GACGGCGGACGGCCGGCAC--ATCGACCAGATCAAGGGGCTGGTGCA 905
Query 1135 GCTGCTTCGCGAGGA-CCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTG 1193
| | || || | ||| | ||||||||| | | || |||| |||||| ||| |
Sbjct 906 -CGACATCAAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCG 964
Query 1194 ACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACG 1253
| ||| || |||||| || ||||| || | |||||||| || |||| |||
Sbjct 965 ATCTCCACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACG 1024
Query 1254 GCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCA 1313
||||||| |||||||| ||||||||||| || ||||| ||||| || ||||||||||
Sbjct 1025 GCCGGCTGTCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCA 1084
Query 1314 ATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGG 1373
| |||||| || ||||| ||| | |||||| | |||||||| ||| ||| | ||
Sbjct 1085 ACATCGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGG 1144
Query 1374 GTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGC 1433
| ||| | ||||||||||||||||| |||||| | || ||||||| |||| |||||||
Sbjct 1145 GCGAGTTCATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGC 1204
Query 1434 TGATGCAGCTCCGCCG 1449
|||||| ||||
Sbjct 1205 GCGAGCAGCTTGGCCG 1220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 296121368814324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |