Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq2071 389 2e-103 seq1636 264 7e-66 >seq2071 Length=31734 Score = 389 bits (430), Expect = 2e-103 Identities = 560/782 (72%), Gaps = 47/782 (6%) Strand=Plus/Minus Query 820 TGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCT 879 ||||| | | ||| || |||||||| |||||||||| ||| ||||||| |||| | Sbjct 12065 TGGCACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGAT 12006 Query 880 GCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATC 939 ||||| |||||| | ||| |||||||||||||| ||||| ||| |||||| | ||||| Sbjct 12005 GCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATC 11946 Query 940 GGTTGCGTACGAACTTCTGTGGTTCCTC-AGTG-----GCGACACGAACGTGAAGGCGCT 993 | |||| || ||||||||||| || | |||||| ||| ||| || Sbjct 11945 CATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAAC---AAGCTGCG 11889 Query 994 CAACGACAACGGCGTCACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGG 1050 | || |||||| |||||||||||||| ||||| ||| | ||||| |||| || Sbjct 11888 C---GAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCG---ACCTGGG 11835 Query 1051 TCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGA- 1109 || || ||||||| ||||||||| ||||| ||| | || || || | | Sbjct 11834 GCCGGTGTACGGCGTGCAGTGGCGCAGCTGGC----CGACACCCGA----CGGCGGGCAC 11783 Query 1110 -TTGACCAGATCTCGGCCGCCGTGGAG--CTGCTTCGCGAGGACCCTGACTCGCGCCGGA 1166 | ||||||||| | | || ||| || | | || | | || ||||||||||| | Sbjct 11782 ATCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCA--ATCCGGACTCGCGCCGCA 11725 Query 1167 ACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACA 1226 | | || ||| |||||||| | ||| || | ||||| || || |||||| Sbjct 11724 TCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACG 11665 Query 1227 TCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCG 1286 | |||||| | ||||||| |||||| ||| ||| ||| | ||||||||||| | Sbjct 11664 CGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTG 11605 Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346 | ||||| ||||| || ||||||||||| |||||| |||||||| ||| |||||||| Sbjct 11604 CCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGA 11545 Query 1347 TCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACA 1406 ||||||||||| || |||| ||| || || | ||||||||||||||||||||||||| Sbjct 11544 TCGCGCAGCAGTGCGACCTGGCGGTCGGCGACTTCATCTGGACCGGCGGCGACTGCCACA 11485 Query 1407 TCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACC 1466 |||||| ||||||| ||| |||| | |||||||| ||| | || | ||||||| Sbjct 11484 TCTACAGCAACCACCACGAGCAGGTGGAACTGCAGCTCTCCCGCCAGCCCCATCCCTACC 11425 Query 1467 CGAGGCTCGTGCT--ACACCACGCGC-------CGTCGATCTTCGACTACCGGTACGAGC 1517 | |||||| ||| || |||| |||||||||||||||||||||||||| Sbjct 11424 C------CGTGCTGGACATCAAGCGCAAGCCGGCGTCGATCTTCGACTACCGGTACGAGG 11371 Query 1518 ACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577 || || | || || ||||| | | || ||| ||||||||||||| ||||| ||||||| Sbjct 11370 ACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATCAAGGCGCCCGTGGCGGTCTGAT 11311 Query 1578 GG 1579 || Sbjct 11310 GG 11309 >seq1636 Length=1555 Score = 264 bits (292), Expect = 7e-66 Identities = 433/616 (70%), Gaps = 10/616 (2%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || ||||||||||| |||||||| ||| |||||| |||| |||||| ||| || || Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTG-CGTACGAACT 954 |||||||||||| || ||||||| ||| | ||| | ||| | ||| ||| | Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGT-CGAGTT 731 Query 955 TCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 ||||||||||| | |||||||| |||||| ||| | || | |||| ||| Sbjct 732 GCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCAT 791 Query 1015 CTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCG 1074 ||||||||| ||||| || | | || | ||||| || || || ||| ||| ||||| Sbjct 792 CTGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 851 Query 1075 GCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGA 1134 ||||| || || | |||| | || | || ||||||||| || ||| | Sbjct 852 CGACTGG---GT-GACGGCGGACGGCCGGCAC--ATCGACCAGATCAAGGGGCTGGTGCA 905 Query 1135 GCTGCTTCGCGAGGA-CCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTG 1193 | | || || | ||| | ||||||||| | | || |||| |||||| ||| | Sbjct 906 -CGACATCAAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCG 964 Query 1194 ACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACG 1253 | ||| || |||||| || ||||| || | |||||||| || |||| ||| Sbjct 965 ATCTCCACGCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACG 1024 Query 1254 GCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCA 1313 ||||||| |||||||| ||||||||||| || ||||| ||||| || |||||||||| Sbjct 1025 GCCGGCTGTCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCA 1084 Query 1314 ATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGG 1373 | |||||| || ||||| ||| | |||||| | |||||||| ||| ||| | || Sbjct 1085 ACATCGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGG 1144 Query 1374 GTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGC 1433 | ||| | ||||||||||||||||| |||||| | || ||||||| |||| ||||||| Sbjct 1145 GCGAGTTCATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGCGC 1204 Query 1434 TGATGCAGCTCCGCCG 1449 |||||| |||| Sbjct 1205 GCGAGCAGCTTGGCCG 1220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296121368814324