Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq741 181 3e-41 >seq741 Length=35645 Score = 181 bits (200), Expect = 3e-41 Identities = 242/330 (73%), Gaps = 10/330 (3%) Strand=Plus/Minus Query 40083 CCGAAGGTCCCGATCTG--TG-CGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTG 40139 ||||||||| ||||||| || || ||| | || || |||||| || | |||||| | Sbjct 10688 CCGAAGGTCGCGATCTGGCTGACGGCCTCG--CGGCC-GTACTTGTCCTTCACGTACTCG 10632 Query 40140 ATCACGTCGCCCCG--TCGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGC 40197 || || | |||| | ||| | || |||||||||||| | ||| ||||| ||||||| Sbjct 10631 ATGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGC 10574 Query 40198 GCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGA 40257 |||| ||||||||||| |||||||| | || || | ||| ||| || ||||| |||| Sbjct 10573 GCTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGA 10514 Query 40258 TGCCGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACA 40317 | ||| | ||||| |||||||| ||||| | || ||||| || || |||||| Sbjct 10513 TCTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACCGGGC 10454 Query 40318 CGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGAACC 40377 |||||| | |||||||||| |||||||||| | |||| |||||||| ||||| | Sbjct 10453 AGCCGTTGTTCTTGGCCCAGTTGATGAAGTCGCCCACGATGAGGAAGTAACCGGGGAATC 10394 Query 40378 CCAGCTGGATGATCATGTCGATCTCGTACT 40407 ||| || | ||| | |||||||| ||| Sbjct 10393 CCATCTTCAGGATGGTCCCGATCTCGAACT 10364 Score = 104 bits (114), Expect = 7e-18 Identities = 214/315 (68%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 39025 ACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGACCGTACGCCG 39084 ||||||||| ||||||| |||||| | | ||| |||| |||| || |||||| | Sbjct 11710 ACTCGGCCGTGTAGTGCACCTTCAGCCAGCCGGTGTGGTACGCGAGCAGCGAGTACGCGG 11651 Query 39085 CAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCACA------ 39138 | | ||||| |||||||||| |||| || ||||| | | || ||| | | Sbjct 11650 CGGCGTGCGACTTGTTGAAGCCGTAGCCCGCGAATTTCTCCATCAGGTCGAAGATCTCGT 11591 Query 39139 CCGCCTGGATG-GCACCGTCCGAGTAGCCTCGCTCGCGCGCTCCCTTCTGGAAGTTCACG 39197 |||||| || | ||| | | | |||| ||||| | ||| |||| || | Sbjct 11590 CCGCCTTCTCCTGCGCGATCCCATT--CTTCGC-CGCGCCCGCCC----GGAAAATCTCC 11538 Query 39198 AACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCC 39257 | || ||||| |||||| ||||||||||||||| || ||||| || ||||| || Sbjct 11537 CGGTGCTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCG 11478 Query 39258 TGACCCAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATG 39317 ||||| |||| || | |||||||| || | || | |||||| |||||||||| Sbjct 11477 CCGCCCAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACC 11418 Query 39318 ACCAGCCCGTAGGTC 39332 | | ||||||||| Sbjct 11417 ATGATTCCGTAGGTC 11403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160135619845472