Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031107.1
Length=246291
Score E
Sequences producing significant alignments: (Bits) Value
seq1636 147 3e-30
seq2071 141 1e-28
>seq1636
Length=1555
Score = 147 bits (162), Expect = 3e-30
Identities = 176/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 201848 GACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTACAA 201907
||||| ||||| |||||||| ||| || ||||| | ||||||||| || | |
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672
Query 201908 GAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGCTG 201967
|| || || ||| || |||||||||| || | ||||| || || |||||| ||| ||
Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732
Query 201968 CTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCATC 202027
||||||||||| || ||||||||| | | | || | || ||| |||| ||||
Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 792
Query 202028 TGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGCG 202086
|||||||||||||||||| | ||||| | ||||||||||| || |||||||||||
Sbjct 793 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCG 851
>seq2071
Length=31734
Score = 141 bits (156), Expect = 1e-28
Identities = 225/320 (70%), Gaps = 2/320 (1%)
Strand=Plus/Minus
Query 202490 CTTTCTTGTCAGCTCTATCAGCGTAGTGCGGACATGTTCCTTGGCGTACCGTTTAACATC 202549
|| || || ||||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||||
Sbjct 11632 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 11573
Query 202550 GCGTCTTACGCCTTGCTGGTACACATGTTTGCACAACAG-GCGAACATGGCGGTAGGCGA 202608
|| ||||| | || |||||| | || || ||| |||| | ||||||| |||||
Sbjct 11572 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACC-TGGCGGTCGGCGA 11514
Query 202609 CTTCGTCTGGACAGGTGGTGATACGCATCTGTACTCCAACCATCTGGAACAAGCTGACCT 202668
|||| ||||||| || || || || | ||| |||||| | || || | || ||
Sbjct 11513 CTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACT 11454
Query 202669 CCAACTTACCCGTGACCCTAAACCGTTACCGAAGTTGGTTATCAAACGTAAGCCCGATTC 202728
|| || |||| | || | || | || | ||| ||||| || ||||| | ||
Sbjct 11453 GCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTC 11394
Query 202729 CATCTTCGACTACAAATTCGAAGACTTCGAGGTTGTCGATTACATTTCGCATCCGGCGAT 202788
|||||||||||| | ||| ||||||||||| | || ||| |||||||||||
Sbjct 11393 GATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGAT 11334
Query 202789 TAAAGCGCCCGTCGCGATCT 202808
|| |||||||| ||| |||
Sbjct 11333 CAAGGCGCCCGTGGCGGTCT 11314
Score = 136 bits (150), Expect = 6e-27
Identities = 179/248 (72%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 201846 CCGACCGTACCGGTACGGGCACCCTCTCTGTTTTCGGACGCCAGATGCGCTTTAACTTAC 201905
||||||| |||||||| ||||| | | || ||||| ||||||||| || || |
Sbjct 12051 CCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGA 11992
Query 201906 AAGAAGGTTTTCCGCTGGTCACCACCAAAAAGGTTCACCTTCGTTCAATCATCCATGAGC 201965
| || || || |||||||| |||||||| ||||| ||||| || |||||||| ||||
Sbjct 11991 ACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGC 11932
Query 201966 TGCTGTGGTTCCTCATGGGTGACACCAACATCCAGTATTTGAAAGACAACAACGTCACCA 202025
||||||||||||| ||| | | ||| | | | || || | ||| ||||
Sbjct 11931 TGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCA 11872
Query 202026 TCTGGGACGAATGGGCGGATAAAAACGGTGACTTAGGCCCGGTGTACGGTAAGCAATGGC 202085
||||||||||||||||| | |||| ||| | || ||||||||||| ||| ||||
Sbjct 11871 TCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGC 11812
Query 202086 GTAGCTGG 202093
| ||||||
Sbjct 11811 GCAGCTGG 11804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 787976368491040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |