Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031126.1
Length=244840
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 145 1e-29
seq1636 84.2 3e-11
>seq2071
Length=31734
Score = 145 bits (160), Expect = 1e-29
Identities = 230/327 (70%), Gaps = 2/327 (1%)
Strand=Plus/Minus
Query 200834 GCGAGCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCA 200893
|| |||| || || |||||||| ||||| || || || || || | |||||||||||||
Sbjct 11637 GCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCA 11578
Query 200894 ACATTGCATCATACGCACTACTGATTCACATGGTAGCCCAACAGGTCAATATGACTGTCG 200953
|||| || ||||| ||||| | |||||| | || || ||| | | || | ||||
Sbjct 11577 ACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCG 11518
Query 200954 GTGATTTCGTATGGACGGGTGGTGACGTACACATCTACAGCAATCACGAAGAGCAGGTTC 201013
| || ||| | ||||| || || ||| |||||||||||||| ||| | ||||||||
Sbjct 11517 GCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGG 11458
Query 201014 GTCTGCAACTGTCTCGTGATCCGCGTCCTTTACCGAAGTTGAAAATTCTTCGTAAGCCGG 201073
||||| || || || | || | ||| | || | || | || || |||||||
Sbjct 11457 AACTGCAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGG 11398
Query 201074 ACTCTATCTTCGATTACAAGTTCGAAGACTTTGAGCTTACTGG-TTACGAACCGCATCCT 201132
|| |||||||| ||| || ||| ||||| ||| | |||| ||| | | |||||
Sbjct 11397 CGTCGATCTTCGACTACCGGTACGAGGACTTCGAG-GTCCTGGACTACCAGCACCATCCG 11339
Query 201133 GCGATAAAAGCACCGGTGGCGATATGA 201159
||||| || || || |||||| | |||
Sbjct 11338 GCGATCAAGGCGCCCGTGGCGGTCTGA 11312
Score = 93.3 bits (102), Expect = 7e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196
|||||||| ||| | || | || |||||||| ||||||| ||||||||| ||| ||
Sbjct 12010 CAGATGCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTG 11951
Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256
|||||||| ||||||||| |||||||||| | || | | | | ||| | |||
Sbjct 11950 AAATCCATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTG 11891
Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCGCGAGACGA 200300
||| | || ||||| ||||||||||||||||| || ||
Sbjct 11890 CGCGAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGA 11847
>seq1636
Length=1555
Score = 84.2 bits (92), Expect = 3e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196
|||||||| ||| |||| || |||||||| || | || |||||||| || ||
Sbjct 652 CAGATGCGGTTCGATCTGGCCGAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTG 711
Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256
|| || ||||| |||| || |||||||||| ||| |||||||| | | |||
Sbjct 712 CGCTCGATCATCGTCGAGTTGCTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTG 771
Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCG 200292
| ||| ||| |||| ||| |||||||||||||||
Sbjct 772 CAGGATCGCAAGGTCAGCATCTGGGACGAATGGGCG 807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783333326592000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |