Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq1636 168 1e-36
seq2071 125 1e-23
>seq1636
Length=1555
Score = 168 bits (186), Expect = 1e-36
Identities = 186/248 (75%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130
||||| |||||||||||||| || | ||||| | |||||||| || || ||| |
Sbjct 613 GACCGCACCGGCACGGGCACGCTCAGCGTCTTCGGCCACCAGATGCGGTTCGATCTGGCC 672
Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190
| || |||||| || |||||||||| || |||||||||| || |||||| ||| ||
Sbjct 673 GAGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTG 732
Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250
||||||||||| ||||||||||||| | | | ||| | || ||| ||||| |||
Sbjct 733 CTGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATC 792
Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGT 196310
||||| || ||||| ||||| | || ||||| ||||| || || || ||||| |||||
Sbjct 793 TGGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGC 852
Query 196311 GCATGGGT 196318
| |||||
Sbjct 853 GACTGGGT 860
Score = 95.1 bits (104), Expect = 2e-14
Identities = 127/174 (73%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 196749 CTGTC-CTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACAT 196807
||||| ||| || || ||||||||| || ||| ||||||| || || |||||||||||
Sbjct 1030 CTGTCGCTG-CAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACAT 1088
Query 196808 CGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGA 196867
||| || || ||| | |||||| |||| ||||| | ||| | |||| ||
Sbjct 1089 CGCCAGCTATGCGCTGCTCACCCACATGCTGGCGCAGCAATGCGGGCTGGAGCCGGGCGA 1148
Query 196868 TTTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGC 196921
||| ||||||| ||||||||| ||| || || || ||||| || || |||||
Sbjct 1149 GTTCATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGGC 1202
>seq2071
Length=31734
Score = 125 bits (138), Expect = 1e-23
Identities = 171/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 196071 GACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGC 196130
||||| ||||| || ||||| | | ||||| || |||||||| || |||||| |
Sbjct 12049 GACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGATGCGGTTCGACCTGAAC 11990
Query 196131 AAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTG 196190
| || ||||||||||| |||||||| ||| | |||||| ||| ||||||||||| |||
Sbjct 11989 GATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATCCACGAGCTG 11930
Query 196191 TTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATC 196250
||||||||||| | ||| | | ||| | | | ||| || | ||| | |||
Sbjct 11929 CTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGCGTGACCATC 11870
Query 196251 TGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCG 196309
||||| || ||||| || || ||||| || || || || ||||| |||||||||
Sbjct 11869 TGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTGCAGTGGCG 11811
Score = 111 bits (122), Expect = 2e-19
Identities = 213/314 (68%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 196749 CTGTCCTGTCAGCTTTACCAGCGCAGTGCAGACGTCTTCCTCGGTGTCCCGTTCAACATC 196808
||||| || ||||| |||||||||||||| ||| ||||||| || || ||||||||||||
Sbjct 11632 CTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTCAACATC 11573
Query 196809 GCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGAT 196868
|| ||||| || | |||||| | || |||||| | | ||| || || ||
Sbjct 11572 GCCAGCTACGCGCTACTCACGCACATGATCGCGCAGCAGTGCGACCTGGCGGTCGGCGAC 11513
Query 196869 TTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTTG 196928
||| ||||||| |||||||| ||| | ||| ||||| | || |||| ||
Sbjct 11512 TTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCACCACGAGCAGGTGGAACTG 11453
Query 196929 CAGCTCTCCCGTGTACCGCATGATCTGCCTAAGCTCGTTATCAAACGTAAACCGGATTCC 196988
||||||||||| || ||| || ||| | ||||| || || |||| ||
Sbjct 11452 CAGCTCTCCCGCCAGCCCCATCCCTACCCCGTGCTGGACATCAAGCGCAAGCCGGCGTCG 11393
Query 196989 ATTTTCGACTATAAGTTCGAAGATTTTGAAATCGTGGGTTACGAAAGCCACCCACCCATT 197048
|| |||||||| || ||| || || || || ||| ||| | ||| || | ||
Sbjct 11392 ATCTTCGACTACCGGTACGAGGACTTCGAGGTCCTGGACTACCAGCACCATCCGGCGATC 11333
Query 197049 AAGGCACCGGTTGC 197062
||||| || || ||
Sbjct 11332 AAGGCGCCCGTGGC 11319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770280971039840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |