Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq2071 215 2e-51
seq1636 143 1e-29
>seq2071
Length=31734
Score = 215 bits (238), Expect = 2e-51
Identities = 366/528 (69%), Gaps = 2/528 (0%)
Strand=Plus/Minus
Query 51798 GACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTC 51857
||||||| | ||||||||||| | |||||||||||||| || | ||| | ||
Sbjct 11998 GACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATC 11939
Query 51858 GGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGC 51917
||| |||||||||| || |||||| | || |||| | || | || ||||
Sbjct 11938 CACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGC 11879
Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977
|| | ||| ||||||||||||||| || | || ||||||| || ||||| || |
Sbjct 11878 GTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTG 11819
Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037
|||||||| || ||| | | |||| | |||||| |||||| |||| ||
Sbjct 11818 CAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGTG 11759
Query 52038 AAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097
|| | || ||| | |||| || || || ||| ||| || ||||| ||||
Sbjct 11758 AAGACCATCAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCG 11699
Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157
|| | | |||||| |||| |||||||| | | ||||| ||||| || || ||
Sbjct 11698 GACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCGGAC 11639
Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217
|| ||||| |||||||| |||| ||||| ||||||||| ||| ||||||| |||||
Sbjct 11638 GGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTC 11579
Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGT 52276
||||| |||||||| | | || ||||| |||| || | |||||| | ||| | ||
Sbjct 11578 AACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGC-AGCAGTGCGACCTGGCGGT 11520
Query 52277 TGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCA 52324
|| || ||||| ||||| || |||||| ||| ||||||| ||||||
Sbjct 11519 CGGCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCA 11472
>seq1636
Length=1555
Score = 143 bits (158), Expect = 1e-29
Identities = 353/530 (67%), Gaps = 4/530 (1%)
Strand=Plus/Plus
Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGC 51867
||||||||||| | ||||||||||||| |||| | | || | ||| |||||||
Sbjct 674 AGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGC 733
Query 51868 TGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTT 51927
||||||| || ||| || ||||| | || || | | |||||||| |
Sbjct 734 TGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCT 793
Query 51928 GGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTA 51987
||||||||||||||||||| ||| | || || || |||||||| ||||| |||||
Sbjct 794 GGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGCG 853
Query 51988 GTTGGGATGCTGGTGG-CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAATCAATT 52046
|||| || || || |||| | |||||| |||||| | | | || | ||
Sbjct 854 ACTGGG-TGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACATC 912
Query 52047 AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGAT 52106
|||| | | || | || || || || ||| | || ||||| || ||| | |
Sbjct 913 AAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCAC 972
Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166
| |||||| |||| || || ||| || ||||| |||||| || | || |||
Sbjct 973 GCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTG 1032
Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226
||| || | || ||||| || |||||||| ||| | ||||| ||||| ||||| |||
Sbjct 1033 TCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCC 1092
Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATT 52285
|||||| | |||| || || || | || | |||| | || || || || || ||
Sbjct 1093 AGCTATGCGCTGCTCACCCACATGCTGGCGC-AGCAATGCGGGCTGGAGCCGGGCGAGTT 1151
Query 52286 CATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGG 52335
||| ||||| || ||||| ||| | || |||||| | |||||||
Sbjct 1152 CATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGG 1201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190089850869640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |