Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2071 215 2e-51 seq1636 143 1e-29 >seq2071 Length=31734 Score = 215 bits (238), Expect = 2e-51 Identities = 366/528 (69%), Gaps = 2/528 (0%) Strand=Plus/Minus Query 51798 GACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTC 51857 ||||||| | ||||||||||| | |||||||||||||| || | ||| | || Sbjct 11998 GACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATC 11939 Query 51858 GGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGC 51917 ||| |||||||||| || |||||| | || |||| | || | || |||| Sbjct 11938 CACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGC 11879 Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977 || | ||| ||||||||||||||| || | || ||||||| || ||||| || | Sbjct 11878 GTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTG 11819 Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037 |||||||| || ||| | | |||| | |||||| |||||| |||| || Sbjct 11818 CAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGTG 11759 Query 52038 AAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097 || | || ||| | |||| || || || ||| ||| || ||||| |||| Sbjct 11758 AAGACCATCAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCG 11699 Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157 || | | |||||| |||| |||||||| | | ||||| ||||| || || || Sbjct 11698 GACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCGGAC 11639 Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217 || ||||| |||||||| |||| ||||| ||||||||| ||| ||||||| ||||| Sbjct 11638 GGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTC 11579 Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGT 52276 ||||| |||||||| | | || ||||| |||| || | |||||| | ||| | || Sbjct 11578 AACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGC-AGCAGTGCGACCTGGCGGT 11520 Query 52277 TGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCA 52324 || || ||||| ||||| || |||||| ||| ||||||| |||||| Sbjct 11519 CGGCGACTTCATCTGGACCGGCGGCGACTGCCACATCTACAGCAACCA 11472 >seq1636 Length=1555 Score = 143 bits (158), Expect = 1e-29 Identities = 353/530 (67%), Gaps = 4/530 (1%) Strand=Plus/Plus Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGC 51867 ||||||||||| | ||||||||||||| |||| | | || | ||| ||||||| Sbjct 674 AGGGCTTCCCGGTGCTCACCACCAAGAAACTGCACCTGCGCTCGATCATCGTCGAGTTGC 733 Query 51868 TGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTT 51927 ||||||| || ||| || ||||| | || || | | |||||||| | Sbjct 734 TGTGGTTCCTGCGCGGCGACACCAACGTGCGCTGGCTGCAGGATCGCAAGGTCAGCATCT 793 Query 51928 GGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTA 51987 ||||||||||||||||||| ||| | || || || |||||||| ||||| ||||| Sbjct 794 GGGACGAATGGGCGGATGAGGCGGGTGATCTCGGCCCGGTGTATGGCAAGCAATGGCGCG 853 Query 51988 GTTGGGATGCTGGTGG-CGGCAAGGTCATCGATCAGATCCATGAAGTCGTCAAATCAATT 52046 |||| || || || |||| | |||||| |||||| | | | || | || Sbjct 854 ACTGGG-TGACGGCGGACGGCCGGCACATCGACCAGATCAAGGGGCTGGTGCACGACATC 912 Query 52047 AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGAT 52106 |||| | | || | || || || || ||| | || ||||| || ||| | | Sbjct 913 AAGACCAACCCCGCCTCGCGCCGCCAGATCGTCACCGCCTGGAACCCCGGCGATCTCCAC 972 Query 52107 GATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTT 52166 | |||||| |||| || || ||| || ||||| |||||| || | || ||| Sbjct 973 GCCATGGCGCTGGCGCCGTGTCATTGCCTGTTCCAGACCTATGTCGCGAACGGCCGGCTG 1032 Query 52167 TCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 ||| || | || ||||| || |||||||| ||| | ||||| ||||| ||||| ||| Sbjct 1033 TCGCTGCAACTCTACCAGCGCTCGGCCGACATCTTCCTTGGCGTGCCGTTCAACATCGCC 1092 Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAATT 52285 |||||| | |||| || || || | || | |||| | || || || || || || Sbjct 1093 AGCTATGCGCTGCTCACCCACATGCTGGCGC-AGCAATGCGGGCTGGAGCCGGGCGAGTT 1151 Query 52286 CATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGG 52335 ||| ||||| || ||||| ||| | || |||||| | ||||||| Sbjct 1152 CATCTGGACCGGCGGCGATTGCCACCTTTATTCCAACCACCTCGATCAGG 1201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190089850869640