Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031262.1 Length=54751 Score E Sequences producing significant alignments: (Bits) Value seq559 356 8e-94 >seq559 Length=35318 Score = 356 bits (394), Expect = 8e-94 Identities = 638/914 (70%), Gaps = 36/914 (4%) Strand=Plus/Plus Query 40819 GGGCAG-GGCATGAACCTGCAGC---AGGCCCACGTCTGTGTCTACATCGGCGTCACGCA 40874 |||||| |||| |||||||||| | |||| | || | | ||||||| | || Sbjct 24594 GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGTCGGCGT-AGGCT 24652 Query 40875 -CAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATTCAGCGTTTCGGCCAAACACACC 40933 ||||||||||||| | |||||| | |||||| | ||||| ||| || | |||| Sbjct 24653 TCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCACC 24712 Query 40934 CTTGCACAGCCCATCTCATCCATTCAGAAACCGAACGGGAAGTGGTTCGCATCATCCGCG 40993 | | | | | ||||||| | ||||| || ||||| || || ||| | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 40994 AGAAATGGGCCCAGCACAGAGAGCTGACATCAACTATGACTGACATAATCCACGAATACG 41053 ||| ||||| | ||| ||||||| | ||| | || || |||| |||||| | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 41054 GGCTTGACCCCGAGG-CAATCTCGGAAGCTCTGCAACGGTCCATCGGATGCGAACGAATC 41112 | || | | || | | ||||| || || | || || ||||| ||| || Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 41113 GAAGCATCCGGCGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGCCCGAAACCAAGTCC 41172 || | | ||||| |||||| | | || ||||||||||||| || | | || Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCT--GCCC 24949 Query 41173 A--TGGGCGACAGCTCGGTAGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACG 41230 ||| ||| | ||||| || ||||| |||||| ||| |||||| ||||||||||| Sbjct 24950 GGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACG 25009 Query 41231 AGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGC 41290 |||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||| Sbjct 25010 AGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGC 25069 Query 41291 AGATGGACTACCTCACGCCGCAGCTGCTGCGCATCCTTGCGCCCGGGCGGATCTACGCCT 41350 ||||||| | || |||||| | ||||| || || ||||| || ||| | ||||| Sbjct 25070 AGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCT 25126 Query 41351 G---CCATGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGCAGGCGTTCCCACCG 41407 | ||| || |||||||| ||| ||||||| || ||||||| || || || |||| Sbjct 25127 GCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCG 25186 Query 41408 TCTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACC 41464 || |||||||||||| || ||| ||| ||| ||||||||| | | | Sbjct 25187 TCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCA 25243 Query 41465 TCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGG 41524 | |||||||||||||| |||||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25244 TGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG- 25302 Query 41525 GCTGGT-CGGAGCAGTGC--AAGGACGCTACGAAGATGGGCGTCGGCTCGCCGGAATACA 41581 | || | | | ||| ||||||| |||||||||||| |||| || |||||| Sbjct 25303 --TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACG 25360 Query 41582 TTCTGTTGTTCCACAGGCCACAGTCAGACCGGTCCAAGGGCTACGCCGACACCCCGGTCA 41641 | ||| || | | || ||| || ||||| || || || |||||||| ||||||| Sbjct 25361 TGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCA 25420 Query 41642 CCAAATCCAAGGACGA---TTACACTCGGGCCCGCTGGCAGGTCGACGCGCACGCGTTCT 41698 |||| || | ||| |||| | ||| || |||||||||||||| ||||| |||| Sbjct 25421 CCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGACGCCCACGCCTTCT 25477 Query 41699 GGCGCTCGAGCGGC 41712 ||||||| |||||| Sbjct 25478 GGCGCTCCAGCGGC 25491 Score = 295 bits (326), Expect = 2e-75 Identities = 326/429 (76%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 40045 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACG 40104 |||| ||| ||||| ||||||||||| ||||| || ||| ||||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 40105 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTACCAGTCG 40164 |||||| || |||||||||||| | || |||||||||||||| ||||| | |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 40165 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACGCCATCGCCG 40224 ||||| ||| ||||| | |||||| ||||| | ||||| |||||||| || ||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 40225 AACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGACACCGGTGCG 40284 ||||| ||||||||||||||||| ||||| |||| ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 40285 GCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCC 40343 |||||||| || | |||||||| || ||| |||||| | | |||||||| ||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCTCTACCC 23082 Query 40344 ACACAAGGAGCGTGAGTTCTTCTTGTGGCTCAACACCTGGGCGGCGTTCGTGCAATCCCC 40403 |||||||| | ||||||| ||||||| || | |||||| | ||| |||| ||| Sbjct 23083 GCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCC 23142 Query 40404 GGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGCTGTG 40460 | |||||||| ||| |||| |||||| || ||||| |||| |||| || Sbjct 23143 GAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTG 23199 Query 40461 GCATGAGGT 40469 ||| ||||| Sbjct 23200 GCACGAGGT 23208 Score = 107 bits (118), Expect = 7e-19 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 42966 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 43025 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 25897 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 25956 Query 43026 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCG 43074 | |||||||||| |||||| |||| || |||||||||||| |||| ||| Sbjct 25957 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGCG 26005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175075936547944