Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031266.1 Length=44872 Score E Sequences producing significant alignments: (Bits) Value seq559 322 1e-83 >seq559 Length=35318 Score = 322 bits (356), Expect = 1e-83 Identities = 330/428 (77%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 38190 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACG 38249 |||| ||| ||||| ||||||||||| ||||| || ||| ||||| ||| ||||| Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843 Query 38250 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTACCAGTCG 38309 |||||| || |||||||||||| | || |||||||||||||| ||||| | |||| || Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903 Query 38310 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 38369 ||||| ||| ||||| | |||||| ||||| | ||||| |||||||| |||||||| Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963 Query 38370 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 38429 ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||||| Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023 Query 38430 GCGCTCACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 38489 |||||||| || | |||||||| || | ||||||| | | ||||||||||||||| Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083 Query 38490 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAATCCCCG 38549 || || ||||| |||||||||||||||||||| | ||||| | ||| |||| |||| Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143 Query 38550 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 38606 |||||||| ||| |||| ||||||||| ||||| |||| ||| ||| Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200 Query 38607 CATGAGGT 38614 || ||||| Sbjct 23201 CACGAGGT 23208 Score = 309 bits (342), Expect = 9e-80 Identities = 547/784 (70%), Gaps = 24/784 (3%) Strand=Plus/Plus Query 39020 CAAGTTCAACGATCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 39079 |||||||||||| | |||||| | |||||| | ||||| ||| || | || || Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCA-CC 24712 Query 39080 CTGTACAGCCC-ATTTGATCCATTCCGAAACCGAGCGGGAAGTGGTGCGGGTGATCCGCG 39138 | || || | | | ||||| ||||||| |||||||| || ||||| | | | | Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772 Query 39139 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATTCATGAGTACG 39198 ||| ||||| | ||| ||| ||| | ||| || ||||| | || || | Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832 Query 39199 GACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGCGAACGCATC 39257 | || | | || | | |||| ||||| | ||||| ||||| ||| || Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891 Query 39258 GAAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCGAGAGA 39317 || | || || || ||| | | || ||||||||||||| | || | | | Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951 Query 39318 ATGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAG 39377 ||| || | ||||| || ||||| |||||| ||| |||||| ||||||||||||| Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011 Query 39378 TACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 39437 |||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||| Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071 Query 39438 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG- 39496 ||||| | || || ||| | ||||| || || ||||||||||| | |||||| Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128 Query 39497 --CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTG 39554 |||||| |||||||| ||| ||||||| || ||||||| || ||||| ||||| Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188 Query 39555 TCCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTC 39611 ||||| |||||| || ||| ||| ||| ||||||||| | | | | Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245 Query 39612 GGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 39671 ||||||||||||||||| ||||| || ||||| || ||||||||||| ||||| ||| Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302 Query 39672 TGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACAT 39727 | || | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| | Sbjct 25303 TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGT 25361 Query 39728 TCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCCGACGTACCGGTCAT 39787 |||||| | | ||| ||||||| ||| | || || || ||||||||| ||||||| Sbjct 25362 GCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCAC 25421 Query 39788 CAAG 39791 |||| Sbjct 25422 CAAG 25425 Score = 136 bits (150), Expect = 1e-27 Identities = 206/287 (72%), Gaps = 22/287 (8%) Strand=Plus/Plus Query 40088 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 40142 |||||| ||| |||||||| ||||| ||||| | | |||| || |||||||| Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831 Query 40143 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 40199 ||||| | |||||| || | ||||| |||||| |||||| || | | Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888 Query 40200 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 40259 | |||||| |||||||| |||||||||||||| || ||||||||| || | ||| | Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948 Query 40260 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 40319 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005 Query 40320 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 40363 | ||| |||||||||||| || ||| || || |||| ||| Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143464159142992