Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_031266.1
Length=44872
Score E
Sequences producing significant alignments: (Bits) Value
seq559 322 1e-83
>seq559
Length=35318
Score = 322 bits (356), Expect = 1e-83
Identities = 330/428 (77%), Gaps = 6/428 (1%)
Strand=Plus/Plus
Query 38190 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACG 38249
|||| ||| ||||| ||||||||||| ||||| || ||| ||||| ||| |||||
Sbjct 22784 ATCTTCCTGACCAATTACGAGAGCGTCCGCGACGGCAAGGTCGACGTCACAACCTTCACC 22843
Query 38250 GCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTACCAGTCG 38309
|||||| || |||||||||||| | || |||||||||||||| ||||| | |||| ||
Sbjct 22844 GCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTCCAGACG 22903
Query 38310 TTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCG 38369
||||| ||| ||||| | |||||| ||||| | ||||| |||||||| ||||||||
Sbjct 22904 TTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCCTCGCCC 22963
Query 38370 AACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACCGGTGCG 38429
||||| ||||||||||||||||| ||||| || | ||||| ||||||||||||||
Sbjct 22964 AACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACCGGCCAA 23023
Query 38430 GCGCTCACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTCTACCCG 38489
|||||||| || | |||||||| || | ||||||| | | |||||||||||||||
Sbjct 23024 GCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTCTACCCG 23083
Query 38490 CATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAATCCCCG 38549
|| || ||||| |||||||||||||||||||| | ||||| | ||| |||| ||||
Sbjct 23084 CACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAGCGCCCG 23143
Query 38550 GCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTGTTGTGG 38606
|||||||| ||| |||| ||||||||| ||||| |||| ||| |||
Sbjct 23144 AGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTGCGCTGG 23200
Query 38607 CATGAGGT 38614
|| |||||
Sbjct 23201 CACGAGGT 23208
Score = 309 bits (342), Expect = 9e-80
Identities = 547/784 (70%), Gaps = 24/784 (3%)
Strand=Plus/Plus
Query 39020 CAAGTTCAACGATCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCGGCCAAACCCATCC 39079
|||||||||||| | |||||| | |||||| | ||||| ||| || | || ||
Sbjct 24654 CAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCCAGCAGTCGCA-CC 24712
Query 39080 CTGTACAGCCC-ATTTGATCCATTCCGAAACCGAGCGGGAAGTGGTGCGGGTGATCCGCG 39138
| || || | | | ||||| ||||||| |||||||| || ||||| | | | |
Sbjct 24713 CGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTGCGCGACCTGCAGG 24772
Query 39139 AGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATCATTCATGAGTACG 39198
||| ||||| | ||| ||| ||| | ||| || ||||| | || || |
Sbjct 24773 CGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATCATCCGCGAATATG 24832
Query 39199 GACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGGATGCGAACGCATC 39257
| || | | || | | |||| ||||| | ||||| ||||| ||| ||
Sbjct 24833 GCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGGCGTCGAGCGGCAG 24891
Query 39258 GAAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCACGAAACCGAGAGA 39317
|| | || || || ||| | | || ||||||||||||| | || | | |
Sbjct 24892 GAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGATGAGGCTGCCCGG 24951
Query 39318 ATGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAG 39377
||| || | ||||| || ||||| |||||| ||| |||||| |||||||||||||
Sbjct 24952 CTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAGCAACCACTACGAG 25011
Query 39378 TACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAG 39437
|||||||||||||||||||| ||||||||||| ||||| ||| |||||||| ||||||
Sbjct 25012 TACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCATTTCTTCGCGCAG 25071
Query 39438 ATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTG- 39496
||||| | || || ||| | ||||| || || ||||||||||| | ||||||
Sbjct 25072 ATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCGGCT---CGCCTGC 25128
Query 39497 --CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGGCGTGCCCACCGTG 39554
|||||| |||||||| ||| ||||||| || ||||||| || ||||| |||||
Sbjct 25129 ATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGGTGTGCCGACCGTC 25188
Query 39555 TCCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGGCTTCGACTACCTC 39611
||||| |||||| || ||| ||| ||| ||||||||| | | | |
Sbjct 25189 AATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGGCTTCCAGTTCATG 25245
Query 39612 GGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGC 39671
||||||||||||||||| ||||| || ||||| || ||||||||||| ||||| |||
Sbjct 25246 GGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGACCTACCGCCTG--- 25302
Query 39672 TGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCTCCCCGGAATACAT 39727
| || | ||| || ||| || |||| ||| ||||||||| |||| ||| |||||| |
Sbjct 25303 TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCAGCCCCGAATACGT 25361
Query 39728 TCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCCGACGTACCGGTCAT 39787
|||||| | | ||| ||||||| ||| | || || || ||||||||| |||||||
Sbjct 25362 GCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCGACACGCCGGTCAC 25421
Query 39788 CAAG 39791
||||
Sbjct 25422 CAAG 25425
Score = 136 bits (150), Expect = 1e-27
Identities = 206/287 (72%), Gaps = 22/287 (8%)
Strand=Plus/Plus
Query 40088 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 40142
|||||| ||| |||||||| ||||| ||||| | | |||| || ||||||||
Sbjct 25777 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 25831
Query 40143 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 40199
||||| | |||||| || | ||||| |||||| |||||| || | |
Sbjct 25832 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 25888
Query 40200 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 40259
| |||||| |||||||| |||||||||||||| || ||||||||| || | ||| |
Sbjct 25889 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 25948
Query 40260 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 40319
| |||||| |||||||||| |||||| |||| || |||||||||||| |||| || |
Sbjct 25949 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 26005
Query 40320 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 40363
| ||| |||||||||||| || ||| || || |||| |||
Sbjct 26006 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 26052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143464159142992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |